ENSGALG00000002284


Gallus gallus

Features
Gene ID: ENSGALG00000002284
  
Biological name :TRAPPC3
  
Synonyms : Q5ZI57 / Trafficking protein particle complex subunit 3 / TRAPPC3
  
Possible biological names infered from orthology : O43617 / O55013 / trafficking protein particle complex 3
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 4113729
Gene end: 4118936
  
Corresponding Affymetrix probe sets: Gga.17582.1.A1_at (Chicken Array)   Gga.17582.1.S1_at (Chicken Array)   Gga.1822.2.S1_s_at (Chicken Array)   GgaAffx.13030.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003580
NCBI entrez gene - 419625     See in Manteia.
RefSeq - NM_001008451
RefSeq - XM_015297660
RefSeq Peptide - NP_001008451
swissprot - Q5ZI57
Ensembl - ENSGALG00000002284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc3ENSDARG00000045364Danio rerio
 O43617ENSG00000054116Homo sapiens
 O55013ENSMUSG00000028847Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRAPPC3L / trafficking protein particle complex 3 like / Q4KL14* / Q5T215* / Trafficking protein particle complex subunit 3-like protein *ENSGALG0000002853963


Protein motifs (from Interpro)
Interpro ID Name
 IPR007194  Transport protein particle (TRAPP) component
 IPR016721  Bet3 family
 IPR024096  NO signalling/Golgi transport ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030008 TRAPP complex IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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