ENSDARG00000045885


Danio rerio

Features
Gene ID: ENSDARG00000045885
  
Biological name :scaf11
  
Synonyms : scaf11 / SR-related CTD-associated factor 11
  
Possible biological names infered from orthology : Q99590
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 1619584
Gene end: 1643101
  
Corresponding Affymetrix probe sets: Dr.6966.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000067443
Ensembl peptide - ENSDARP00000125045
NCBI entrez gene - 566484     See in Manteia.
swissprot - F8W5M3
swissprot - Q5SPB2
ZFIN ID - ZDB-GENE-041210-22
Ensembl - ENSDARG00000045885
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCAF11ENSGALG00000028849Gallus gallus
 Q99590ENSG00000139218Homo sapiens
 Scaf11ENSMUSG00000033228Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phrf1 / PHD and ring finger domains 1 / A6H619* / Q9P1Y6* / PHD and RING finger domain-containing protein 1 *ENSDARG0000007525213
scaf1 / SR-related CTD-associated factor 1 / Q5U4C3* / Q9H7N4* / Splicing factor, arginine/serine-rich 19 *ENSDARG0000005401011


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr