ENSDARG00000046072


Danio rerio

Features
Gene ID: ENSDARG00000046072
  
Biological name :snx16
  
Synonyms : snx16 / sorting nexin 16
  
Possible biological names infered from orthology : P57768 / Q8C080
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 42117231
Gene end: 42121054
  
Corresponding Affymetrix probe sets: Dr.22636.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000067733
swissprot - F1R052
ZFIN ID - ZDB-GENE-040426-1832
Ensembl - ENSDARG00000046072
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX16ENSGALG00000029678Gallus gallus
 SNX16ENSG00000104497Homo sapiens
 Snx16ENSMUSG00000027534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006622 protein targeting to lysosome IBA
 biological_processGO:0008333 endosome to lysosome transport IBA
 biological_processGO:0045022 early endosome to late endosome transport IBA
 cellular_componentGO:0005769 early endosome IBA
 cellular_componentGO:0005770 late endosome IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031313 extrinsic component of endosome membrane IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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