ENSG00000104497


Homo sapiens

Features
Gene ID: ENSG00000104497
  
Biological name :SNX16
  
Synonyms : P57768 / SNX16 / sorting nexin 16
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q21.13
Gene start: 81799581
Gene end: 81842866
  
Corresponding Affymetrix probe sets: 219793_at (Human Genome U133 Plus 2.0 Array)   229618_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000322652
Ensembl peptide - ENSP00000379621
Ensembl peptide - ENSP00000481148
Ensembl peptide - ENSP00000430585
Ensembl peptide - ENSP00000430038
Ensembl peptide - ENSP00000428734
Ensembl peptide - ENSP00000428699
Ensembl peptide - ENSP00000428591
Ensembl peptide - ENSP00000428289
Ensembl peptide - ENSP00000427876
Ensembl peptide - ENSP00000322631
NCBI entrez gene - 64089     See in Manteia.
OMIM - 614903
RefSeq - XM_011517574
RefSeq - NM_022133
RefSeq - NM_152836
RefSeq - NM_152837
RefSeq - XM_005251282
RefSeq - XM_005251283
RefSeq Peptide - NP_690049
RefSeq Peptide - NP_690050
RefSeq Peptide - NP_071416
swissprot - E5RJ81
swissprot - E5RJ65
swissprot - E5RHF1
swissprot - E5RH07
swissprot - E5RGS8
swissprot - E5RG30
swissprot - E5RGQ6
swissprot - A0A0C4DGW2
swissprot - P57768
Ensembl - ENSG00000104497
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx16ENSDARG00000046072Danio rerio
 SNX16ENSGALG00000029678Gallus gallus
 Snx16ENSMUSG00000027534Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006622 protein targeting to lysosome IMP
 biological_processGO:0008333 endosome to lysosome transport IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0045022 early endosome to late endosome transport IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IDA
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031313 extrinsic component of endosome membrane IDA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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