ENSDARG00000051737


Danio rerio

Features
Gene ID: ENSDARG00000051737
  
Biological name :zgc:173552
  
Synonyms : zgc:173552
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 36329623
Gene end: 36330033
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067896
NCBI entrez gene - 108190746     See in Manteia.
NCBI entrez gene - 108190747     See in Manteia.
NCBI entrez gene - 103909889     See in Manteia.
NCBI entrez gene - 794406     See in Manteia.
swissprot - A8KBJ5
ZFIN ID - ZDB-GENE-080220-24
Ensembl - ENSDARG00000051737
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:173552ENSDARG00000114334100
zgc:173552ENSDARG00000112175100
zgc:173552ENSDARG00000111396100
zgc:173552ENSDARG00000112131100
zgc:173552ENSDARG00000105345100
zgc:173552ENSDARG00000110909100
si:dkey-23a13.21ENSDARG0000010550899
Q4QRF4 / CU457819.3 / Histone H3.2 / Q71DI3* / HIST2H3C* / histone cluster 2 H3 family member c*ENSDARG0000010541899
FQ312024.1ENSDARG0000011437099
CR762436.2 / Q71DI3* / HIST2H3D* / histone cluster 2 H3 family member d*ENSDARG0000011296799
Q4QRF4 / CU457819.4 / Histone H3.2 ENSDARG0000010545999
Q4QRF4 / hist2h3c / histone cluster 2, H3cENSDARG0000009415499
Q4QRF4 / CU459186.2 / Histone H3.2 ENSDARG0000010172099
CR354435.5 / P84228* / Hist2h3c2* / Histone H3.2 *ENSDARG0000011416999
Q4QRF4 / CU459186.3 / Histone H3.2 ENSDARG0000010381999
Q4QRF4 / CU459186.1 / Histone H3.2 ENSDARG0000009897099
CR762436.1 / P84228* / Hist2h3c1* / Histone H3.2 *ENSDARG0000011237599
CU302436.5 / P84228* / Hist1h3d* / Hist1h3f* / Histone H3.2 *ENSDARG0000011450099
HIST2H3C / zgc:173552 / Q71DI3* / histone cluster 2 H3 family member c*ENSDARG0000011564499
Q4QRF4 / FP325123.2 / Histone H3.2 / P04908* / P84228* / Hist1h3e* / HIST1H2AB* / HIST1H2AE* / histone cluster 1 H2A family member e* / histone cluster 1 H2A family member b*ENSDARG0000010548499


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IBA
 cellular_componentGO:0000786 nucleosome IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr