ENSDARG00000112647


Danio rerio

Features
Gene ID: ENSDARG00000112647
  
Biological name :si:dkey-108k21.24
  
Synonyms : si:dkey-108k21.24
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 35102371
Gene end: 35102824
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127819
Ensembl peptide - ENSDARP00000157586
NCBI entrez gene - 100334933     See in Manteia.
NCBI entrez gene - 103909883     See in Manteia.
NCBI entrez gene - 100037365     See in Manteia.
NCBI entrez gene - 100329422     See in Manteia.
swissprot - X1WC76
ZFIN ID - ZDB-GENE-131121-40
Ensembl - ENSDARG00000112647
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q4QRF4 / CU459186.1 / Histone H3.2 ENSDARG0000009897090
CR354435.5 / P84228* / Hist2h3c2* / Histone H3.2 *ENSDARG0000011416990
Q4QRF4 / FP325123.1 / Histone H3.2 ENSDARG0000010535990
Q4QRF4 / CU457819.4 / Histone H3.2 ENSDARG0000010545990
Q4QRF4 / hist2h3c / histone cluster 2, H3cENSDARG0000009415490
Q4QRF4 / FP325123.2 / Histone H3.2 / P04908* / P84228* / Hist1h3e* / HIST1H2AB* / HIST1H2AE* / histone cluster 1 H2A family member e* / histone cluster 1 H2A family member b*ENSDARG0000010548490
HIST2H3C / zgc:173552 / Q71DI3* / histone cluster 2 H3 family member c*ENSDARG0000011564490
Q4QRF4 / zgc:113983ENSDARG0000006894190
Q4QRF4 / CU457819.2 / Histone H3.2 ENSDARG0000010537490
CR762436.2 / Q71DI3* / HIST2H3D* / histone cluster 2 H3 family member d*ENSDARG0000011296790
CU302436.5 / P84228* / Hist1h3d* / Hist1h3f* / Histone H3.2 *ENSDARG0000011450090
CR762436.1 / P84228* / Hist2h3c1* / Histone H3.2 *ENSDARG0000011237590
Q4QRF4 / CU457819.3 / Histone H3.2 / Q71DI3* / HIST2H3C* / histone cluster 2 H3 family member c*ENSDARG0000010541890
FQ312024.1ENSDARG0000011437090
Q4QRF4 / CU459186.3 / Histone H3.2 ENSDARG0000010381990
Q4QRF4 / CU459186.2 / Histone H3.2 ENSDARG0000010172090
zgc:173552ENSDARG0000005173789
zgc:173552ENSDARG0000011139689
zgc:173552ENSDARG0000011433489
zgc:173552ENSDARG0000010534589


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IBA
 cellular_componentGO:0000786 nucleosome IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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