ENSDARG00000094154


Danio rerio

Features
Gene ID: ENSDARG00000094154
  
Biological name :hist2h3c
  
Synonyms : hist2h3c / histone cluster 2, H3c / Q4QRF4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 35051656
Gene end: 35052155
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000112824
NCBI entrez gene - 100329422     See in Manteia.
NCBI entrez gene - 100334933     See in Manteia.
NCBI entrez gene - 103909883     See in Manteia.
NCBI entrez gene - 570618     See in Manteia.
NCBI entrez gene - 100037365     See in Manteia.
RefSeq - NM_001100173
RefSeq Peptide - NP_001093643
swissprot - Q4QRF4
ZFIN ID - ZDB-GENE-070424-8
Ensembl - ENSDARG00000094154
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P84229ENSGALG00000037930Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q4QRF4 / CU459186.3 / Histone H3.2 ENSDARG00000103819100
CR354435.5 / P84228* / Hist2h3c2* / Histone H3.2 *ENSDARG00000114169100
Q4QRF4 / CU459186.2 / Histone H3.2 ENSDARG00000101720100
Q4QRF4 / CU457819.4 / Histone H3.2 ENSDARG00000105459100
Q4QRF4 / FP325123.1 / Histone H3.2 ENSDARG00000105359100
si:dkey-108k21.24ENSDARG00000112647100
Q4QRF4 / CU457819.2 / Histone H3.2 ENSDARG00000105374100
Q4QRF4 / zgc:113983ENSDARG00000068941100
HIST2H3C / zgc:173552 / Q71DI3* / histone cluster 2 H3 family member c*ENSDARG00000115644100
Q4QRF4 / FP325123.2 / Histone H3.2 / P04908* / P84228* / Hist1h3e* / HIST1H2AB* / HIST1H2AE* / histone cluster 1 H2A family member e* / histone cluster 1 H2A family member b*ENSDARG00000105484100
CR762436.1 / P84228* / Hist2h3c1* / Histone H3.2 *ENSDARG00000112375100
CU302436.5 / P84228* / Hist1h3d* / Hist1h3f* / Histone H3.2 *ENSDARG00000114500100
CR762436.2 / Q71DI3* / HIST2H3D* / histone cluster 2 H3 family member d*ENSDARG00000112967100
FQ312024.1ENSDARG00000114370100
Q4QRF4 / CU457819.3 / Histone H3.2 / Q71DI3* / HIST2H3C* / histone cluster 2 H3 family member c*ENSDARG00000105418100
Q4QRF4 / CU459186.1 / Histone H3.2 ENSDARG00000098970100
zgc:173552ENSDARG0000010534599
zgc:173552ENSDARG0000011139699
zgc:173552ENSDARG0000011217599
zgc:173552ENSDARG0000011213199


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IBA
 cellular_componentGO:0000786 nucleosome IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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