ENSDARG00000052419


Danio rerio

Features
Gene ID: ENSDARG00000052419
  
Biological name :ankrd12
  
Synonyms : ankrd12 / ankyrin repeat domain 12
  
Possible biological names infered from orthology : Q6UB98
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 54696042
Gene end: 54786748
  
Corresponding Affymetrix probe sets: Dr.12671.1.S1_at (Zebrafish Array)   Dr.20685.1.A1_at (Zebrafish Array)   Dr.7290.1.A1_at (Zebrafish Array)   NM_200150_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000068759
Ensembl peptide - ENSDARP00000117121
Ensembl peptide - ENSDARP00000088636
NCBI entrez gene - 393119     See in Manteia.
RefSeq - NM_200150
RefSeq - XM_017357916
RefSeq Peptide - NP_956444
swissprot - F1QF31
swissprot - E9QIK1
swissprot - B8JLP7
ZFIN ID - ZDB-GENE-040426-846
Ensembl - ENSDARG00000052419
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ANKRD12ENSGALG00000008399Gallus gallus
 Q6UB98ENSG00000101745Homo sapiens
 Ankrd12ENSMUSG00000034647Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ankrd11 / ankyrin repeat domain 11 / Q6UB99*ENSDARG0000005188633
tonsl / tonsoku-like, DNA repair protein / Q96HA7*ENSDARG000000712947
bard1 / BRCA1 associated RING domain 1 / O70445* / Q99728* / BRCA1-associated RING domain protein 1 *ENSDARG000000767335
bcor / BCL6 corepressor / Q6W2J9* / Q8CGN4*ENSDARG000000177984
bcorl1 / BCL6 corepressor-like 1 / A2AQH4* / Q5H9F3* / BCL-6 corepressor-like protein 1 *ENSDARG000000779124
slf1 / SMC5-SMC6 complex localization factor 1 / Q8R3P9* / Q9BQI6*ENSDARG000001021183
ankrd31 / ankyrin repeat domain 31 / Q8N7Z5*ENSDARG000000527311


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr