ENSDARG00000102118


Danio rerio

Features
Gene ID: ENSDARG00000102118
  
Biological name :slf1
  
Synonyms : slf1 / SMC5-SMC6 complex localization factor 1
  
Possible biological names infered from orthology : Q8R3P9 / Q9BQI6
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 50371509
Gene end: 50437164
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133242
Ensembl peptide - ENSDARP00000136942
Ensembl peptide - ENSDARP00000151850
NCBI entrez gene - 101882450     See in Manteia.
swissprot - A0A0R4IHW2
swissprot - A0A0R4INB3
ZFIN ID - ZDB-GENE-141216-402
Ensembl - ENSDARG00000102118
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000027932Gallus gallus
 SLF1ENSG00000133302Homo sapiens
 Slf1ENSMUSG00000021597Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bcor / BCL6 corepressor / Q6W2J9* / Q8CGN4*ENSDARG0000001779811
tonsl / tonsoku-like, DNA repair protein / Q96HA7*ENSDARG0000007129410
bcorl1 / BCL6 corepressor-like 1 / A2AQH4* / Q5H9F3* / BCL-6 corepressor-like protein 1 *ENSDARG000000779128
ankrd12 / ankyrin repeat domain 12 / Q6UB98*ENSDARG000000524197
ankrd11 / ankyrin repeat domain 11 / Q6UB99*ENSDARG000000518867
bard1 / BRCA1 associated RING domain 1 / O70445* / Q99728* / BRCA1-associated RING domain protein 1 *ENSDARG000000767337
ankrd31 / ankyrin repeat domain 31 / Q8N7Z5*ENSDARG000000527312


Protein motifs (from Interpro)
Interpro ID Name
 IPR001357  BRCT domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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