ENSDARG00000054220


Danio rerio

Features
Gene ID: ENSDARG00000054220
  
Biological name :ap4s1
  
Synonyms : adaptor-related protein complex 4, sigma 1 subunit / ap4s1
  
Possible biological names infered from orthology : AP-4 complex subunit sigma-1 / Q9WVL1 / Q9Y587
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 28703971
Gene end: 28707970
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000156083
Ensembl peptide - ENSDARP00000070883
Ensembl peptide - ENSDARP00000061852
Ensembl peptide - ENSDARP00000121518
NCBI entrez gene - 368852     See in Manteia.
RefSeq - NM_001003826
RefSeq - XM_005158761
RefSeq Peptide - NP_001003826
swissprot - K9J6Q2
swissprot - E9QFP9
swissprot - Q29RE3
swissprot - Q78AM7
ZFIN ID - ZDB-GENE-030616-404
Ensembl - ENSDARG00000054220
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AP4S1ENSGALG00000009936Gallus gallus
 AP4S1ENSG00000100478Homo sapiens
 Ap4s1ENSMUSG00000020955Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ap1s1 / adaptor-related protein complex 1, sigma 1 subunit / P61966* / P61967* / AP-1 complex subunit sigma-1A *ENSDARG0000005680340
ap1s2 / adaptor-related protein complex 1, sigma 2 subunitENSDARG0000005850440
ap2s1 / adaptor-related protein complex 2, sigma 1 subunit / P53680* / P62743* / AP-2 complex subunit sigma *ENSDARG0000002696739
ap1s3b / adaptor-related protein complex 1, sigma 3 subunit, b / AP1S3* / Q96PC3* / Q7TN05* / AP-1 complex subunit sigma-3 * / adaptor related protein complex 1 sigma 3 subunit*ENSDARG0000002796639
ap1s3a / adaptor-related protein complex 1, sigma 3 subunit, a / AP1S3* / Q96PC3* / adaptor related protein complex 1 sigma 3 subunit*ENSDARG0000011043935
CABZ01102528.1ENSDARG0000009899024
AP1S2 / adaptor related protein complex 1 sigma 2 subunit / P56377*ENSDARG0000011322511


Protein motifs (from Interpro)
Interpro ID Name
 IPR011012  Longin-like domain superfamily
 IPR016635  Adaptor protein complex, sigma subunit
 IPR022775  AP complex, mu/sigma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0008565 protein transporter activity IEA


Pathways (from Reactome)
Pathway description
Lysosome Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000056871 ap4m1 / adaptor-related protein complex 4, mu 1 subunit / O00189* / Q9JKC7* / AP-4 complex subunit mu-1 *  / complex
 ENSDARG00000103684 ap4e1 / adaptor-related protein complex 4, epsilon 1 subunit / Q80V94* / Q9UPM8* / AP-4 complex subunit epsilon-1 *  / complex






 

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