ENSDARG00000054501


Danio rerio

Features
Gene ID: ENSDARG00000054501
  
Biological name :stambpa
  
Synonyms : STAM binding protein a / stambpa
  
Possible biological names infered from orthology : O95630 / Q9CQ26 / STAM binding protein / STAMBP
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 42111288
Gene end: 42131408
  
Corresponding Affymetrix probe sets: Dr.17380.1.S1_at (Zebrafish Array)   NM_200498_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000068121
Ensembl peptide - ENSDARP00000071164
NCBI entrez gene - 797422     See in Manteia.
RefSeq - NM_200498
RefSeq Peptide - NP_956792
swissprot - F1QBG8
swissprot - E9QD36
ZFIN ID - ZDB-GENE-040426-1551
Ensembl - ENSDARG00000054501
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STAMBPENSGALG00000042555Gallus gallus
 O95630ENSG00000124356Homo sapiens
 Q9CQ26ENSMUSG00000006906Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stambpb / STAM binding protein b / O95630* / Q9CQ26* / STAMBP* / STAM binding protein*ENSDARG0000008690666
stambpl1 / STAM binding protein-like 1 / Q76N33* / Q96FJ0* / AMSH-like protease *ENSDARG0000000308548


Protein motifs (from Interpro)
Interpro ID Name
 IPR000555  JAB1/MPN/MOV34 metalloenzyme domain
 IPR015063  USP8 dimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Metalloprotease DUBs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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