ENSG00000124356


Homo sapiens

Features
Gene ID: ENSG00000124356
  
Biological name :STAMBP
  
Synonyms : O95630 / STAM binding protein / STAMBP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: p13.1
Gene start: 73828916
Gene end: 73873659
  
Corresponding Affymetrix probe sets: 202811_at (Human Genome U133 Plus 2.0 Array)   227515_at (Human Genome U133 Plus 2.0 Array)   235361_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386548
Ensembl peptide - ENSP00000377636
Ensembl peptide - ENSP00000390921
Ensembl peptide - ENSP00000443502
Ensembl peptide - ENSP00000413874
Ensembl peptide - ENSP00000413291
Ensembl peptide - ENSP00000344742
Ensembl peptide - ENSP00000377633
NCBI entrez gene - 10617     See in Manteia.
OMIM - 606247
RefSeq - XM_017003181
RefSeq - NM_001353973
RefSeq - NM_001353975
RefSeq - NM_006463
RefSeq - NM_201647
RefSeq - NM_213622
RefSeq - XM_005264088
RefSeq - XM_011532483
RefSeq - XM_011532484
RefSeq - XM_011532485
RefSeq - XM_017003175
RefSeq - XM_017003176
RefSeq - XM_017003177
RefSeq - XM_017003178
RefSeq - XM_017003179
RefSeq - XM_017003180
RefSeq - NM_001353967
RefSeq - NM_001353968
RefSeq - NM_001353971
RefSeq - NM_001353972
RefSeq Peptide - NP_001340897
RefSeq Peptide - NP_001340902
RefSeq Peptide - NP_001340904
RefSeq Peptide - NP_006454
RefSeq Peptide - NP_964010
RefSeq Peptide - NP_998787
RefSeq Peptide - NP_001340896
RefSeq Peptide - NP_001340900
RefSeq Peptide - NP_001340901
swissprot - C9JK83
swissprot - C9JEK5
swissprot - F5H5B9
swissprot - C9JZ93
swissprot - O95630
swissprot - A0A140VK54
Ensembl - ENSG00000124356
  
Related genetic diseases (OMIM): 614261 - Microcephaly-capillary malformation syndrome, 614261
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stambpaENSDARG00000054501Danio rerio
 stambpbENSDARG00000086906Danio rerio
 STAMBPENSGALG00000042555Gallus gallus
 Q9CQ26ENSMUSG00000006906Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96FJ0 / STAMBPL1 / STAM binding protein like 1ENSG0000013813453


Protein motifs (from Interpro)
Interpro ID Name
 IPR000555  JAB1/MPN/MOV34 metalloenzyme domain
 IPR015063  USP8 dimerisation domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR037518  MPN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000281 mitotic cytokinesis IMP
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0007259 JAK-STAT cascade TAS
 biological_processGO:0008284 positive regulation of cell proliferation TAS
 biological_processGO:0014067 negative regulation of phosphatidylinositol 3-kinase signaling IMP
 biological_processGO:0016579 protein deubiquitination IMP
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0046580 negative regulation of Ras protein signal transduction IMP
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0032154 cleavage furrow IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Metalloprotease DUBs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000076 Vesicoureteral reflux "Abnormal (retrograde) movement of urine from the bladder into ureters or kidneys related to inadequacy of the valvular mechanism at the ureterovesicular junction or other causes." [HPO:curators]
Show

 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
Show

 HP:0000253 Microcephaly, progressive "Progressive microcephaly is diagnosed when the head circumference falls progressively behind age- and gender-dependent norms." [HPO:curators]
Show

 HP:0000316 Hypertelorism 
Show

 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
Show

 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
Show

 HP:0000365 Hearing loss 
Show

 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
Show

 HP:0000445 Broad nose 
Show

 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
Show

 HP:0000648 Optic atrophy 
Show

 HP:0001156 Brachydactyly 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001285 Spastic tetraparesis "Spastic weakness affecting all four limbs." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
Show

 HP:0001508 Failure to thrive 
Show

 HP:0001518 Low birth weight 
Show

 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
Show

 HP:0001655 Patent foramen ovale 
Show

 HP:0001667 Right ventricular hypertrophy "In this case the right ventricle is more muscular than normal, causing a characteristic boot-shaped (coeur-en-sabot) appearance as seen on anterior- posterior chest x-rays. Right ventricular hypertrophy is commonly associated with any form of right ventricular outflow obstruction or pulmonary hypertension, which may in turn owe its origin to left-sided disease. The echocardiographic signs are thickening of the anterior right ventricular wall and the septum. Cavity size is usually normal, or slightly enlarged. In many cases there is associated volume overload present due to tricuspid regurgitation, in the absence of this, septal motion is normal. This feature can also be a component of the separat entity tetralogy of Fallot in which case it is generally agreed to be a secondary anomaly, as the level of hypertrophy generally increases with age." [HPO:curators]
Show

 HP:0001792 Nail hypoplasia "Underdeveloped `fingernails` (FMA:54327) or `toenails` (FMA:54328)." [HPO:probinson]
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
Show

 HP:0003577 Onset at birth 
Show

 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
Show

 HP:0009882 Hypoplasia of the distal phalanges of the hand 
Show

 HP:0010721 Abnormal hair whorl "An abnormal hair whorl (that is, a patch of hair growing in the opposite direction of the rest of the hair)." [HPO:probinson]
Show

 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
Show

 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
Show

 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000136738 STAM / Q92783 / signal transducing adaptor molecule  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr