ENSDARG00000086906


Danio rerio

Features
Gene ID: ENSDARG00000086906
  
Biological name :stambpb
  
Synonyms : STAM binding protein b / stambpb
  
Possible biological names infered from orthology : O95630 / Q9CQ26 / STAM binding protein / STAMBP
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 52530889
Gene end: 52547957
  
Corresponding Affymetrix probe sets: Dr.2704.1.A1_at (Zebrafish Array)   NM_001037570_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000110215
Ensembl peptide - ENSDARP00000139750
Ensembl peptide - ENSDARP00000135522
NCBI entrez gene - 641572     See in Manteia.
RefSeq - NM_001037570
RefSeq Peptide - NP_001032659
swissprot - A0A0R4IUL5
swissprot - A0A0R4IIS6
swissprot - F1QW91
ZFIN ID - ZDB-GENE-051127-31
Ensembl - ENSDARG00000086906
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STAMBPENSGALG00000042555Gallus gallus
 O95630ENSG00000124356Homo sapiens
 Q9CQ26ENSMUSG00000006906Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stambpa / STAM binding protein a / O95630* / Q9CQ26* / STAMBP* / STAM binding protein*ENSDARG0000005450165
stambpl1 / STAM binding protein-like 1 / Q76N33* / Q96FJ0* / AMSH-like protease *ENSDARG0000000308546


Protein motifs (from Interpro)
Interpro ID Name
 IPR000555  JAB1/MPN/MOV34 metalloenzyme domain
 IPR015063  USP8 dimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Metalloprotease DUBs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr