ENSDARG00000054609


Danio rerio

Features
Gene ID: ENSDARG00000054609
  
Biological name :slco2b1
  
Synonyms : slco2b1 / solute carrier organic anion transporter family, member 2B1
  
Possible biological names infered from orthology : O94956 / Q8BXB6
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 40139036
Gene end: 40174677
  
Corresponding Affymetrix probe sets: Dr.10559.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000071311
Ensembl peptide - ENSDARP00000120042
Ensembl peptide - ENSDARP00000148714
Ensembl peptide - ENSDARP00000150275
NCBI entrez gene - 792084     See in Manteia.
RefSeq - XM_021468920
RefSeq - NM_001037678
RefSeq Peptide - NP_001032767
swissprot - F1Q5M5
swissprot - Q3B7Q4
ZFIN ID - ZDB-GENE-051023-6
Ensembl - ENSDARG00000054609
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLCO2B1ENSGALG00000017302Gallus gallus
 O94956ENSG00000137491Homo sapiens
 Q8BXB6ENSMUSG00000030737Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slco2a1 / solute carrier organic anion transporter family, member 2A1 / Q92959* / Q9EPT5*ENSDARG0000006189639
slco5a1a / solute carrier organic anion transporter family member 5A1a / Q9H2Y9* / SLCO5A1* / solute carrier organic anion transporter family member 5A1*ENSDARG0000007168529
slco3a1 / solute carrier organic anion transporter family, member 3A1 / Q8R3L5* / Q9UIG8*ENSDARG0000001872629
CR938716.1 / Q8R3L5* / Q9UIG8* / SLCO3A1* / solute carrier organic anion transporter family member 3A1*ENSDARG0000006829629
slco1c1 / solute carrier organic anion transporter family, member 1C1 / Q9ERB5* / Q9NYB5*ENSDARG0000001674929
slco1e1 / solute carrier organic anion transporter family, member 1E1ENSDARG0000010078029
slco1d1 / solute carrier organic anion transporter family, member 1D1ENSDARG0000010410828
slco1f2 / solute carrier organic anion transporter family, member 1F2ENSDARG0000010115627
slco1f4 / solute carrier organic anion transporter family, member 1F4ENSDARG0000010101427
slco1f3 / solute carrier organic anion transporter family, member 1F3ENSDARG0000010569126
slco1f1 / solute carrier organic anion transporter family, member 1F1ENSDARG0000010228325
slco4a1 / solute carrier organic anion transporter family, member 4A1 / Q96BD0*ENSDARG0000007594825


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA


Pathways (from Reactome)
Pathway description
Transport of organic anions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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