ENSDARG00000105691


Danio rerio

Features
Gene ID: ENSDARG00000105691
  
Biological name :slco1f3
  
Synonyms : slco1f3 / solute carrier organic anion transporter family, member 1F3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 77322543
Gene end: 77332032
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135867
Ensembl peptide - ENSDARP00000137208
Ensembl peptide - ENSDARP00000135999
NCBI entrez gene - 100190900     See in Manteia.
RefSeq - NM_001135684
RefSeq Peptide - NP_001129156
swissprot - A0A0N4SU58
swissprot - A0A0N4SU37
swissprot - A0A0G2KTW5
ZFIN ID - ZDB-GENE-080212-5
Ensembl - ENSDARG00000105691
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slco1f2 / solute carrier organic anion transporter family, member 1F2ENSDARG0000010115684
slco1f4 / solute carrier organic anion transporter family, member 1F4ENSDARG0000010101484
slco1f1 / solute carrier organic anion transporter family, member 1F1ENSDARG0000010228380
slco1c1 / solute carrier organic anion transporter family, member 1C1 / Q9ERB5* / Q9NYB5*ENSDARG0000001674944
slco1d1 / solute carrier organic anion transporter family, member 1D1ENSDARG0000010410843
slco1e1 / solute carrier organic anion transporter family, member 1E1ENSDARG0000010078043
CR938716.1 / Q8R3L5* / Q9UIG8* / SLCO3A1* / solute carrier organic anion transporter family member 3A1*ENSDARG0000006829633
slco3a1 / solute carrier organic anion transporter family, member 3A1 / Q8R3L5* / Q9UIG8*ENSDARG0000001872632
slco2a1 / solute carrier organic anion transporter family, member 2A1 / Q92959* / Q9EPT5*ENSDARG0000006189631
slco2b1 / solute carrier organic anion transporter family, member 2B1 / O94956* / Q8BXB6*ENSDARG0000005460930
slco4a1 / solute carrier organic anion transporter family, member 4A1 / Q96BD0*ENSDARG0000007594828
slco5a1a / solute carrier organic anion transporter family member 5A1a / Q9H2Y9* / SLCO5A1* / solute carrier organic anion transporter family member 5A1*ENSDARG0000007168524


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0043252 sodium-independent organic anion transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0015347 sodium-independent organic anion transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr