ENSDARG00000102283


Danio rerio

Features
Gene ID: ENSDARG00000102283
  
Biological name :slco1f1
  
Synonyms : slco1f1 / solute carrier organic anion transporter family, member 1F1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 72092423
Gene end: 72144903
  
Corresponding Affymetrix probe sets: Dr.16401.1.A1_at (Zebrafish Array)   NM_212917_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000132188
Ensembl peptide - ENSDARP00000157182
Ensembl peptide - ENSDARP00000136186
NCBI entrez gene - 405853     See in Manteia.
RefSeq - NM_212917
RefSeq Peptide - NP_998082
swissprot - A0A0R4INU2
swissprot - A0A0R4IBD9
ZFIN ID - ZDB-GENE-040426-2192
Ensembl - ENSDARG00000102283
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slco1f4 / solute carrier organic anion transporter family, member 1F4ENSDARG0000010101487
slco1f2 / solute carrier organic anion transporter family, member 1F2ENSDARG0000010115687
slco1f3 / solute carrier organic anion transporter family, member 1F3ENSDARG0000010569184
slco1e1 / solute carrier organic anion transporter family, member 1E1ENSDARG0000010078045
slco1c1 / solute carrier organic anion transporter family, member 1C1 / Q9ERB5* / Q9NYB5*ENSDARG0000001674945
slco1d1 / solute carrier organic anion transporter family, member 1D1ENSDARG0000010410843
slco3a1 / solute carrier organic anion transporter family, member 3A1 / Q8R3L5* / Q9UIG8*ENSDARG0000001872633
CR938716.1 / Q8R3L5* / Q9UIG8* / SLCO3A1* / solute carrier organic anion transporter family member 3A1*ENSDARG0000006829633
slco2a1 / solute carrier organic anion transporter family, member 2A1 / Q92959* / Q9EPT5*ENSDARG0000006189632
slco2b1 / solute carrier organic anion transporter family, member 2B1 / O94956* / Q8BXB6*ENSDARG0000005460930
slco4a1 / solute carrier organic anion transporter family, member 4A1 / Q96BD0*ENSDARG0000007594829
slco5a1a / solute carrier organic anion transporter family member 5A1a / Q9H2Y9* / SLCO5A1* / solute carrier organic anion transporter family member 5A1*ENSDARG0000007168527


Protein motifs (from Interpro)
Interpro ID Name
 IPR002350  Kazal domain
 IPR004156  Organic anion transporter polypeptide
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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