ENSDARG00000055502


Danio rerio

Features
Gene ID: ENSDARG00000055502
  
Biological name :cicb
  
Synonyms : capicua transcriptional repressor b / cicb
  
Possible biological names infered from orthology : capicua transcriptional repressor / CIC / Q924A2 / Q96RK0
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 11151699
Gene end: 11224444
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000115789
Ensembl peptide - ENSDARP00000150349
NCBI entrez gene - 323246     See in Manteia.
RefSeq - XM_002664811
swissprot - F1Q6M9
ZFIN ID - ZDB-GENE-030131-1966
Ensembl - ENSDARG00000055502
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CICENSG00000079432Homo sapiens
 CicENSMUSG00000005442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cica / capicua transcriptional repressor a / CIC* / Q924A2* / Q96RK0* / capicua transcriptional repressor*ENSDARG0000007115036
bbx / bobby sox homolog (Drosophila) / Q8VBW5* / Q8WY36* / BBX, HMG-box containing* / HMG box transcription factor BBX *ENSDARG000000126995


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR032147  Domain of unknown function DUF4819


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060319 primitive erythrocyte differentiation IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000041 mesoderm mesoderm increased amount , abnormal
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 ZFA:0009015 erythroid progenitor cell erythroid progenitor cell increased amount , abnormal
Show

 ZFA:0009325 erythroid lineage cell erythroid lineage cell increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr