ENSDARG00000071150


Danio rerio

Features
Gene ID: ENSDARG00000071150
  
Biological name :cica
  
Synonyms : capicua transcriptional repressor a / cica
  
Possible biological names infered from orthology : capicua transcriptional repressor / CIC / Q924A2 / Q96RK0
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 6085784
Gene end: 6134802
  
Corresponding Affymetrix probe sets: Dr.13863.1.S1_at (Zebrafish Array)   Dr.13863.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113238
swissprot - F1R060
ZFIN ID - ZDB-GENE-060503-700
Ensembl - ENSDARG00000071150
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CICENSG00000079432Homo sapiens
 CicENSMUSG00000005442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cicb / capicua transcriptional repressor b / CIC* / Q924A2* / Q96RK0* / capicua transcriptional repressor*ENSDARG0000005550238
bbx / bobby sox homolog (Drosophila) / Q8VBW5* / Q8WY36* / BBX, HMG-box containing* / HMG box transcription factor BBX *ENSDARG000000126995


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR032147  Domain of unknown function DUF4819


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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