Manteia

ENSDARG00000055647

Danio rerio

Features

Gene ID:	ENSDARG00000055647

Biological name :	ftr82

Synonyms :	finTRIM family, member 82 / ftr82

Possible biological names infered from orthology :	Q8C0E3 / Q96LD4 / TRIM47 / Trim80 / tripartite motif containing 47 / tripartite motif-containing 80

Species:	Danio rerio

Chr. number:	5
Strand:	-1
Band:
Gene start:	30707133
Gene end:	30715225

Corresponding Affymetrix probe sets:	Dr.5037.1.A1_at (Zebrafish Array) NM_001075103_at (Zebrafish Genome Array with custom cdf files)

Cross references:	Ensembl peptide - ENSDARP00000007384 NCBI entrez gene - 338307 See in Manteia. RefSeq - NM_001075103 RefSeq Peptide - NP_001068571 swissprot - A2BFT4 ZFIN ID - ZDB-GENE-030219-207 Ensembl - ENSDARG00000055647

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
TRIM47	ENSGALG00000028301	Gallus gallus
Q96LD4	ENSG00000132481	Homo sapiens
Q8C0E3	ENSMUSG00000020773	Mus musculus
Trim80	ENSMUSG00000070332	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
ftr99 / finTRIM family, member 99 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000035339	51
ftr14 / finTRIM family, member 14 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000053293	48
ftr12 / ftr96 / finTRIM family, member 12 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000053366	47
ftr56 / finTRIM family, member 56 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000030954	46
ftr13 / finTRIM family, member 13 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000079537	46
ftr11 / finTRIM family, member 11 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000038646	46
ftr24 / finTRIM family, member 24 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000008396	46
ftr42 / finTRIM family, member 42 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000114992	46
ftr16 / ftr96 / finTRIM family, member 96 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000032043	46
ftr61 / finTRIM family, member 61 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000055520	45
ftr01 / finTRIM family, member 1 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000003909	45
ftr51 / finTRIM family, member 51 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000029105	45
FO834803.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000111722	45
ftr64 / finTRIM family, member 64 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000101514	44
ftr55 / finTRIM family, member 55 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000009161	44
ftr58 / finTRIM family, member 58 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000071238	44
ftr66 / finTRIM family, member 66 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000005327	44
CR352329.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000055476	44
ftr57 / finTRIM family, member 57 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000074360	44
ftr23 / finTRIM family, member 23 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000067985	43

Protein motifs (from Interpro)

Interpro ID	Name
IPR000315	B-box-type zinc finger
IPR001841	Zinc finger, RING-type
IPR001870	B30.2/SPRY domain
IPR003877	SPRY domain
IPR003879	Butyrophylin-like, SPRY domain
IPR006574	SPRY-associated
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR017907	Zinc finger, RING-type, conserved site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0008270	zinc ion binding	IEA
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr