ENSG00000132481


Homo sapiens

Features
Gene ID: ENSG00000132481
  
Biological name :TRIM47
  
Synonyms : Q96LD4 / TRIM47 / tripartite motif containing 47
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.1
Gene start: 75874161
Gene end: 75878575
  
Corresponding Affymetrix probe sets: 225868_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467645
Ensembl peptide - ENSP00000254816
Ensembl peptide - ENSP00000465010
Ensembl peptide - ENSP00000465038
NCBI entrez gene - 91107     See in Manteia.
OMIM - 611041
RefSeq - XM_005257788
RefSeq - NM_033452
RefSeq - XM_005257787
RefSeq Peptide - NP_258411
swissprot - A0A0M3HER3
swissprot - Q96LD4
swissprot - K7EJ63
swissprot - K7EQ30
Ensembl - ENSG00000132481
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX769173.1ENSDARG00000110960Danio rerio
 BX769173.2ENSDARG00000111935Danio rerio
 CR352329.1ENSDARG00000055476Danio rerio
 CR853294.1ENSDARG00000040536Danio rerio
 FO834803.1ENSDARG00000111722Danio rerio
 ftr01ENSDARG00000003909Danio rerio
 ftr05ENSDARG00000078065Danio rerio
 ftr08ENSDARG00000095448Danio rerio
 ftr11ENSDARG00000038646Danio rerio
 ftr12ENSDARG00000053366Danio rerio
 ftr12ENSDARG00000074118Danio rerio
 ftr13ENSDARG00000079537Danio rerio
 ftr14ENSDARG00000053293Danio rerio
 ftr14lENSDARG00000078254Danio rerio
 ftr16ENSDARG00000032043Danio rerio
 ftr19ENSDARG00000094131Danio rerio
 ftr22ENSDARG00000076969Danio rerio
 ftr23ENSDARG00000067985Danio rerio
 ftr24ENSDARG00000008396Danio rerio
 ftr25ENSDARG00000093651Danio rerio
 ftr26ENSDARG00000092961Danio rerio
 ftr29ENSDARG00000075355Danio rerio
 ftr32ENSDARG00000110978Danio rerio
 ftr32ENSDARG00000093203Danio rerio
 ftr33ENSDARG00000095032Danio rerio
 ftr34ENSDARG00000079614Danio rerio
 ftr35ENSDARG00000089388Danio rerio
 ftr36ENSDARG00000087057Danio rerio
 ftr37ENSDARG00000092745Danio rerio
 ftr38ENSDARG00000095678Danio rerio
 ftr42ENSDARG00000114992Danio rerio
 ftr43ENSDARG00000076106Danio rerio
 ftr50ENSDARG00000115041Danio rerio
 ftr50ENSDARG00000112545Danio rerio
 ftr50ENSDARG00000054153Danio rerio
 ftr50ENSDARG00000116623Danio rerio
 ftr51ENSDARG00000029105Danio rerio
 ftr53ENSDARG00000041220Danio rerio
 ftr54ENSDARG00000043850Danio rerio
 ftr55ENSDARG00000009161Danio rerio
 ftr56ENSDARG00000030954Danio rerio
 ftr57ENSDARG00000074360Danio rerio
 ftr58ENSDARG00000071238Danio rerio
 ftr59ENSDARG00000095864Danio rerio
 ftr61ENSDARG00000055520Danio rerio
 ftr64ENSDARG00000101514Danio rerio
 ftr66ENSDARG00000005327Danio rerio
 ftr67ENSDARG00000098820Danio rerio
 ftr72ENSDARG00000026704Danio rerio
 ftr76ENSDARG00000076093Danio rerio
 ftr79ENSDARG00000093972Danio rerio
 ftr80ENSDARG00000067661Danio rerio
 ftr82ENSDARG00000055647Danio rerio
 ftr83ENSDARG00000025403Danio rerio
 ftr86ENSDARG00000076839Danio rerio
 ftr88ENSDARG00000097679Danio rerio
 ftr90ENSDARG00000097373Danio rerio
 ftr91ENSDARG00000098004Danio rerio
 ftr93ENSDARG00000039852Danio rerio
 ftr95ENSDARG00000073735Danio rerio
 ftr97ENSDARG00000055436Danio rerio
 ftr99ENSDARG00000035339Danio rerio
 si:dkeyp-110c7.8ENSDARG00000101155Danio rerio
 si:zfos-979f1.2ENSDARG00000011652Danio rerio
 trim25lENSDARG00000020863Danio rerio
 zgc:136302ENSDARG00000109055Danio rerio
 TRIM47ENSGALG00000028301Gallus gallus
 Q8C0E3ENSMUSG00000020773Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q14258 / TRIM25 / tripartite motif containing 25ENSG0000012106024
Q6PJ69 / TRIM65 / tripartite motif containing 65ENSG0000014156922
O95361 / TRIM16 / tripartite motif containing 16ENSG0000022192620
Q14134 / TRIM29 / tripartite motif containing 29ENSG0000013769917
AC005324.3ENSG0000025153716
Q309B1 / TRIM16L / tripartite motif containing 16 likeENSG0000010844813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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