ENSG00000221926


Homo sapiens

Features
Gene ID: ENSG00000221926
  
Biological name :TRIM16
  
Synonyms : O95361 / TRIM16 / tripartite motif containing 16
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p12
Gene start: 15627960
Gene end: 15684311
  
Corresponding Affymetrix probe sets: 1559681_a_at (Human Genome U133 Plus 2.0 Array)   204341_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000465169
Ensembl peptide - ENSP00000467031
Ensembl peptide - ENSP00000465907
Ensembl peptide - ENSP00000338989
Ensembl peptide - ENSP00000399918
Ensembl peptide - ENSP00000462903
Ensembl peptide - ENSP00000463188
Ensembl peptide - ENSP00000463293
Ensembl peptide - ENSP00000463360
Ensembl peptide - ENSP00000463639
Ensembl peptide - ENSP00000464072
NCBI entrez gene - 10626     See in Manteia.
OMIM - 609505
RefSeq - NM_006470
RefSeq Peptide - NP_001335048
RefSeq Peptide - NP_001335049
RefSeq Peptide - NP_006461
swissprot - K7EJH2
swissprot - K7EL43
swissprot - K7ENN8
swissprot - B3KP96
swissprot - O95361
swissprot - J3QKY5
swissprot - J3QL38
swissprot - J3QLP0
swissprot - J3QR69
Ensembl - ENSG00000221926
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim16ENSDARG00000010673Danio rerio
 Q99PP9ENSMUSG00000047821Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC005324.3ENSG0000025153785
Q309B1 / TRIM16L / tripartite motif containing 16 likeENSG0000010844860
Q14258 / TRIM25 / tripartite motif containing 25ENSG0000012106023
Q96LD4 / TRIM47 / tripartite motif containing 47ENSG0000013248123
Q14134 / TRIM29 / tripartite motif containing 29ENSG0000013769919
Q6PJ69 / TRIM65 / tripartite motif containing 65ENSG0000014156918


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0032526 response to retinoic acid IEP
 biological_processGO:0043966 histone H3 acetylation IDA
 biological_processGO:0043967 histone H4 acetylation IDA
 biological_processGO:0045618 positive regulation of keratinocyte differentiation IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0046683 response to organophosphorus IEP
 biological_processGO:0048386 positive regulation of retinoic acid receptor signaling pathway IDA
 biological_processGO:0050718 positive regulation of interleukin-1 beta secretion IMP
 biological_processGO:0060416 response to growth hormone IDA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016605 PML body IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019966 interleukin-1 binding IPI
 molecular_functionGO:0032089 NACHT domain binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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