ENSG00000141569


Homo sapiens

Features
Gene ID: ENSG00000141569
  
Biological name :TRIM65
  
Synonyms : Q6PJ69 / TRIM65 / tripartite motif containing 65
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.1
Gene start: 75880335
Gene end: 75897003
  
Corresponding Affymetrix probe sets: 235081_x_at (Human Genome U133 Plus 2.0 Array)   239374_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000269383
Ensembl peptide - ENSP00000441480
Ensembl peptide - ENSP00000444607
Ensembl peptide - ENSP00000465034
Ensembl peptide - ENSP00000466353
NCBI entrez gene - 201292     See in Manteia.
RefSeq - XM_017024344
RefSeq - NM_173547
RefSeq - XM_006721760
RefSeq - XM_006721761
RefSeq - XM_011524499
RefSeq - XM_011524500
RefSeq - XM_011524503
RefSeq - XM_017024343
RefSeq - NM_001256124
RefSeq Peptide - NP_001243053
RefSeq Peptide - NP_775818
swissprot - K7EM44
swissprot - H0YGS7
swissprot - H0YG27
swissprot - Q6PJ69
swissprot - K7EJ59
Ensembl - ENSG00000141569
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim65ENSDARG00000077098Danio rerio
 Q8BFW4ENSMUSG00000054517Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q96LD4 / TRIM47 / tripartite motif containing 47ENSG0000013248128
Q14258 / TRIM25 / tripartite motif containing 25ENSG0000012106023
O95361 / TRIM16 / tripartite motif containing 16ENSG0000022192619
AC005324.3ENSG0000025153717
Q14134 / TRIM29 / tripartite motif containing 29ENSG0000013769917
Q309B1 / TRIM16L / tripartite motif containing 16 likeENSG0000010844813


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010508 positive regulation of autophagy IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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