ENSG00000108448


Homo sapiens

Features
Gene ID: ENSG00000108448
  
Biological name :TRIM16L
  
Synonyms : Q309B1 / TRIM16L / tripartite motif containing 16 like
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p11.2
Gene start: 18697998
Gene end: 18736118
  
Corresponding Affymetrix probe sets: 1559681_a_at (Human Genome U133 Plus 2.0 Array)   204341_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000379030
NCBI entrez gene - 147166     See in Manteia.
RefSeq - XM_017024252
RefSeq - NM_001037330
RefSeq - XM_017024246
RefSeq - XM_017024247
RefSeq - XM_017024248
RefSeq - XM_017024249
RefSeq - XM_017024250
RefSeq - XM_017024251
RefSeq - XM_005256480
RefSeq - XM_005256481
RefSeq - XM_005256483
RefSeq - XM_011523689
RefSeq - XM_011523690
RefSeq - XM_017024245
RefSeq Peptide - NP_001340149
RefSeq Peptide - NP_001340151
RefSeq Peptide - NP_001340152
RefSeq Peptide - NP_001340153
RefSeq Peptide - NP_001032407
swissprot - Q309B1
Ensembl - ENSG00000108448
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim16ENSDARG00000010673Danio rerio
 Q99PP9ENSMUSG00000047821Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O95361 / TRIM16 / tripartite motif containing 16ENSG0000022192697
AC005324.3ENSG0000025153773
Q96LD4 / TRIM47 / tripartite motif containing 47ENSG0000013248124
Q14258 / TRIM25 / tripartite motif containing 25ENSG0000012106022
Q6PJ69 / TRIM65 / tripartite motif containing 65ENSG0000014156919
Q14134 / TRIM29 / tripartite motif containing 29ENSG0000013769915


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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