Manteia

ENSDARG00000075355

Danio rerio

Features

Gene ID:	ENSDARG00000075355

Biological name :	ftr29

Synonyms :	finTRIM family, member 29 / ftr29

Possible biological names infered from orthology :	Q8C0E3 / Q96LD4 / TRIM47 / Trim80 / tripartite motif containing 47 / tripartite motif-containing 80

Species:	Danio rerio

Chr. number:	2
Strand:	-1
Band:
Gene start:	59221948
Gene end:	59231111

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000117996 Ensembl peptide - ENSDARP00000145039 swissprot - B0S651 ZFIN ID - ZDB-GENE-050417-159 Ensembl - ENSDARG00000075355

See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
TRIM47	ENSGALG00000028301	Gallus gallus
Q96LD4	ENSG00000132481	Homo sapiens
Q8C0E3	ENSMUSG00000020773	Mus musculus
Trim80	ENSMUSG00000070332	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
ftr33 / finTRIM family, member 33 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000095032	92
ftr35 / ftr37 / finTRIM family, member 35 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000089388	89
ftr95 / finTRIM family, member 95 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000073735	89
ftr37 / finTRIM family, member 37 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000092745	89
ftr34 / finTRIM family, member 34 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000079614	89
ftr08 / ftr30 / finTRIM family, member 30 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000095448	88
ftr36 / finTRIM family, member 36 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000087057	87
FO834803.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000111722	86
ftr38 / finTRIM family, member 38 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000095678	78
ftr14 / finTRIM family, member 14 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000053293	68
ftr12 / ftr96 / finTRIM family, member 12 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000053366	66
ftr16 / ftr96 / finTRIM family, member 96 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000032043	65
ftr11 / finTRIM family, member 11 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000038646	65
ftr13 / finTRIM family, member 13 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000079537	65
ftr61 / finTRIM family, member 61 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000055520	61
ftr12 / ftr15 / finTRIM family, member 15 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000074118	61
ftr56 / finTRIM family, member 56 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000030954	60
ftr42 / finTRIM family, member 42 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000114992	60
ftr58 / finTRIM family, member 58 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000071238	59
CR352329.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000055476	59

Protein motifs (from Interpro)

Interpro ID	Name
IPR000315	B-box-type zinc finger
IPR001841	Zinc finger, RING-type
IPR001870	B30.2/SPRY domain
IPR006574	SPRY-associated
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR017907	Zinc finger, RING-type, conserved site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0008270	zinc ion binding	IEA
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

1 s.

External programs and data are copyrighted by and are the property of their respective authors. The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation
		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr