Manteia

ENSDARG00000071238

Danio rerio

Features

Gene ID:	ENSDARG00000071238

Biological name :	ftr58

Synonyms :	finTRIM family, member 58 / ftr58

Possible biological names infered from orthology :	Q8C0E3 / Q96LD4 / TRIM47 / Trim80 / tripartite motif containing 47 / tripartite motif-containing 80

Species:	Danio rerio

Chr. number:	23
Strand:	-1
Band:
Gene start:	6856469
Gene end:	6865962

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000056425 NCBI entrez gene - 557916 See in Manteia. RefSeq - XM_681071 swissprot - E7F4P5 ZFIN ID - ZDB-GENE-080219-44 Ensembl - ENSDARG00000071238

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
TRIM47	ENSGALG00000028301	Gallus gallus
Q96LD4	ENSG00000132481	Homo sapiens
Q8C0E3	ENSMUSG00000020773	Mus musculus
Trim80	ENSMUSG00000070332	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
ftr57 / finTRIM family, member 57 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000074360	74
ftr42 / finTRIM family, member 42 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000114992	73
ftr59 / finTRIM family, member 59 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000095864	73
ftr51 / finTRIM family, member 51 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000029105	61
ftr12 / ftr96 / finTRIM family, member 12 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000053366	61
ftr14 / finTRIM family, member 14 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000053293	60
ftr56 / finTRIM family, member 56 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000030954	60
ftr11 / finTRIM family, member 11 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000038646	60
FO834803.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000111722	60
ftr61 / finTRIM family, member 61 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000055520	60
ftr16 / ftr96 / finTRIM family, member 96 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000032043	60
ftr13 / finTRIM family, member 13 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000079537	58
ftr23 / finTRIM family, member 23 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000067985	58
ftr33 / finTRIM family, member 33 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000095032	57
CR352329.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000055476	57
ftr64 / finTRIM family, member 64 / Q96LD4* / TRIM47* / tripartite motif containing 47*	ENSDARG00000101514	56
ftr93 / finTRIM family, member 93 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000039852	56
ftr35 / ftr37 / finTRIM family, member 35 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000089388	56
ftr01 / finTRIM family, member 1 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000003909	56
ftr29 / finTRIM family, member 29 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*	ENSDARG00000075355	56

Protein motifs (from Interpro)

Interpro ID	Name
IPR000315	B-box-type zinc finger
IPR001841	Zinc finger, RING-type
IPR001870	B30.2/SPRY domain
IPR003877	SPRY domain
IPR003879	Butyrophylin-like, SPRY domain
IPR006574	SPRY-associated
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR017907	Zinc finger, RING-type, conserved site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005622	intracellular	IEA
molecular_function	GO:0008270	zinc ion binding	IEA
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr