ENSGALG00000028301


Gallus gallus

Features
Gene ID: ENSGALG00000028301
  
Biological name :TRIM47
  
Synonyms : TRIM47 / tripartite motif containing 47
  
Possible biological names infered from orthology : Q8C0E3 / Q96LD4
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 4688727
Gene end: 4692190
  
Corresponding Affymetrix probe sets: GgaAffx.25425.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042798
Ensembl peptide - ENSGALP00000046200
NCBI entrez gene - 770100     See in Manteia.
RefSeq - XM_003642325
swissprot - A0A1D5P0M2
swissprot - R4GKU1
Ensembl - ENSGALG00000028301
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX769173.1ENSDARG00000110960Danio rerio
 BX769173.2ENSDARG00000111935Danio rerio
 CR352329.1ENSDARG00000055476Danio rerio
 CR853294.1ENSDARG00000040536Danio rerio
 FO834803.1ENSDARG00000111722Danio rerio
 ftr01ENSDARG00000003909Danio rerio
 ftr05ENSDARG00000078065Danio rerio
 ftr08ENSDARG00000095448Danio rerio
 ftr11ENSDARG00000038646Danio rerio
 ftr12ENSDARG00000053366Danio rerio
 ftr12ENSDARG00000074118Danio rerio
 ftr13ENSDARG00000079537Danio rerio
 ftr14ENSDARG00000053293Danio rerio
 ftr14lENSDARG00000078254Danio rerio
 ftr16ENSDARG00000032043Danio rerio
 ftr19ENSDARG00000094131Danio rerio
 ftr22ENSDARG00000076969Danio rerio
 ftr23ENSDARG00000067985Danio rerio
 ftr24ENSDARG00000008396Danio rerio
 ftr25ENSDARG00000093651Danio rerio
 ftr26ENSDARG00000092961Danio rerio
 ftr29ENSDARG00000075355Danio rerio
 ftr32ENSDARG00000110978Danio rerio
 ftr32ENSDARG00000093203Danio rerio
 ftr33ENSDARG00000095032Danio rerio
 ftr34ENSDARG00000079614Danio rerio
 ftr35ENSDARG00000089388Danio rerio
 ftr36ENSDARG00000087057Danio rerio
 ftr37ENSDARG00000092745Danio rerio
 ftr38ENSDARG00000095678Danio rerio
 ftr42ENSDARG00000114992Danio rerio
 ftr43ENSDARG00000076106Danio rerio
 ftr50ENSDARG00000115041Danio rerio
 ftr50ENSDARG00000112545Danio rerio
 ftr50ENSDARG00000054153Danio rerio
 ftr50ENSDARG00000116623Danio rerio
 ftr51ENSDARG00000029105Danio rerio
 ftr53ENSDARG00000041220Danio rerio
 ftr54ENSDARG00000043850Danio rerio
 ftr55ENSDARG00000009161Danio rerio
 ftr56ENSDARG00000030954Danio rerio
 ftr57ENSDARG00000074360Danio rerio
 ftr58ENSDARG00000071238Danio rerio
 ftr59ENSDARG00000095864Danio rerio
 ftr61ENSDARG00000055520Danio rerio
 ftr64ENSDARG00000101514Danio rerio
 ftr66ENSDARG00000005327Danio rerio
 ftr67ENSDARG00000098820Danio rerio
 ftr72ENSDARG00000026704Danio rerio
 ftr76ENSDARG00000076093Danio rerio
 ftr79ENSDARG00000093972Danio rerio
 ftr80ENSDARG00000067661Danio rerio
 ftr82ENSDARG00000055647Danio rerio
 ftr83ENSDARG00000025403Danio rerio
 ftr86ENSDARG00000076839Danio rerio
 ftr88ENSDARG00000097679Danio rerio
 ftr90ENSDARG00000097373Danio rerio
 ftr91ENSDARG00000098004Danio rerio
 ftr93ENSDARG00000039852Danio rerio
 ftr95ENSDARG00000073735Danio rerio
 ftr97ENSDARG00000055436Danio rerio
 ftr99ENSDARG00000035339Danio rerio
 si:dkeyp-110c7.8ENSDARG00000101155Danio rerio
 si:zfos-979f1.2ENSDARG00000011652Danio rerio
 trim25lENSDARG00000020863Danio rerio
 zgc:136302ENSDARG00000109055Danio rerio
 Q96LD4ENSG00000132481Homo sapiens
 Q8C0E3ENSMUSG00000020773Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM25 / Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. / Q14258* / Q61510* / tripartite motif containing 25* / E3 ubiquitin/ISG15 ligase TRIM25 *ENSGALG0000000314416
TRIM29 / tripartite motif containing 29 / Q14134* / Q8R2Q0* / Tripartite motif-containing protein 29 *ENSGALG000000423609


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005829 cytosol IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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