ENSDARG00000055436


Danio rerio

Features
Gene ID: ENSDARG00000055436
  
Biological name :ftr97
  
Synonyms : finTRIM family, member 97 / ftr97
  
Possible biological names infered from orthology : Q8C0E3 / Q96LD4 / TRIM47 / Trim80 / tripartite motif containing 47 / tripartite motif-containing 80
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 26931496
Gene end: 26937453
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116012
NCBI entrez gene - 100150342     See in Manteia.
RefSeq - XM_002665722
swissprot - Q5RIK1
ZFIN ID - ZDB-GENE-061026-1
Ensembl - ENSDARG00000055436
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM47ENSGALG00000028301Gallus gallus
 Q96LD4ENSG00000132481Homo sapiens
 Q8C0E3ENSMUSG00000020773Mus musculus
 Trim80ENSMUSG00000070332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ftr79 / finTRIM family, member 79 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009397255
ftr24 / finTRIM family, member 24 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000839625
ftr14 / finTRIM family, member 14 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005329325
ftr01 / finTRIM family, member 1 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000390924
CR352329.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000005547624
ftr13 / finTRIM family, member 13 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007953724
ftr61 / finTRIM family, member 61 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005552024
ftr23 / finTRIM family, member 23 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000006798524
ftr64 / finTRIM family, member 64 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000010151424
ftr16 / ftr96 / finTRIM family, member 96 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003204324
ftr56 / finTRIM family, member 56 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003095423
ftr12 / ftr96 / finTRIM family, member 12 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005336623
FO834803.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000011172223
ftr11 / finTRIM family, member 11 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003864623
ftr66 / finTRIM family, member 66 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000532723
ftr93 / finTRIM family, member 93 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003985222
ftr82 / finTRIM family, member 82 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005564722
ftr36 / finTRIM family, member 36 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000008705722
ftr35 / ftr37 / finTRIM family, member 35 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000008938822
ftr55 / finTRIM family, member 55 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000916122


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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