ENSDARG00000055770


Danio rerio

Features
Gene ID: ENSDARG00000055770
  
Biological name :dffa
  
Synonyms : dffa / DNA fragmentation factor, alpha polypeptide
  
Possible biological names infered from orthology : DNA fragmentation factor subunit alpha / O00273 / O54786
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 28803007
Gene end: 28808480
  
Corresponding Affymetrix probe sets: Dr.14913.1.A1_at (Zebrafish Array)   NM_001002631_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000072629
NCBI entrez gene - 436904     See in Manteia.
RefSeq - NM_001002631
RefSeq Peptide - NP_001002631
swissprot - F1R3G3
ZFIN ID - ZDB-GENE-040718-376
Ensembl - ENSDARG00000055770
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DFFAENSGALG00000002820Gallus gallus
 DFFAENSG00000160049Homo sapiens
 DffaENSMUSG00000028974Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003508  CIDE-N domain
 IPR015121  DNA fragmentation factor 45kDa, middle domain
 IPR017299  DNA fragmentation factor subunit alpha
 IPR027296  DNA fragmentation factor 45kDa, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:1900118 negative regulation of execution phase of apoptosis IBA
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
Activation of DNA fragmentation factor


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr