ENSDARG00000055955


Danio rerio

Features
Gene ID: ENSDARG00000055955
  
Biological name :lcp2a
  
Synonyms : lcp2a / lymphocyte cytosolic protein 2a
  
Possible biological names infered from orthology : LCP2 / lymphocyte cytosolic protein 2 / Q13094 / Q60787
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 30306369
Gene end: 30347592
  
Corresponding Affymetrix probe sets: Dr.6762.1.A1_at (Zebrafish Array)   NM_214717_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059419
Ensembl peptide - ENSDARP00000118381
NCBI entrez gene - 336073     See in Manteia.
RefSeq - NM_214717
RefSeq - XM_005161291
RefSeq Peptide - NP_999882
swissprot - F1QSV9
swissprot - A0A0R4ICU8
swissprot - E9QJA2
ZFIN ID - ZDB-GENE-041114-97
Ensembl - ENSDARG00000055955
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LCP2ENSGALG00000002113Gallus gallus
 LCP2ENSG00000043462Homo sapiens
 Lcp2ENSMUSG00000002699Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lcp2b / lymphocyte cytosolic protein 2bENSDARG0000003621530
blnk / B cell linker / Q8WV28* / Q9QUN3* / B-cell linker protein *ENSDARG0000004272215
si:dkeyp-117b11.1 / SH2D6* / Q7Z4S9* / SH2 domain containing 6*ENSDARG0000009060715
CABZ01088229.1 / CLNK* / Q7Z7G1* / cytokine dependent hematopoietic cell linker*ENSDARG0000009132113


Protein motifs (from Interpro)
Interpro ID Name
 IPR000980  SH2 domain
 IPR001660  Sterile alpha motif domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IBA
 biological_processGO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IBA
 biological_processGO:0035556 intracellular signal transduction IBA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
GPVI-mediated activation cascade
Generation of second messenger molecules
DAP12 signaling
FCERI mediated MAPK activation
FCERI mediated Ca+2 mobilization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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