ENSDARG00000056672


Danio rerio

Features
Gene ID: ENSDARG00000056672
  
Biological name :abcb8
  
Synonyms : abcb8 / ATP-binding cassette, sub-family B (MDR/TAP), member 8
  
Possible biological names infered from orthology : ATP binding cassette subfamily B member 8 / Q9CXJ4 / Q9NUT2
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 33781485
Gene end: 33801668
  
Corresponding Affymetrix probe sets: Dr.18475.1.A1_at (Zebrafish Array)   NM_001017544_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073658
NCBI entrez gene - 548340     See in Manteia.
RefSeq - NM_001017544
RefSeq Peptide - NP_001017544
swissprot - F1QTQ6
ZFIN ID - ZDB-GENE-050410-6
Ensembl - ENSDARG00000056672
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCB8ENSG00000197150Homo sapiens
 Abcb8ENSMUSG00000028973Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcb10 / ATP-binding cassette, sub-family B (MDR/TAP), member 10 / Q9JI39* / Q9NRK6* / ATP binding cassette subfamily B member 10*ENSDARG0000006159134
abcb9 / ATP-binding cassette, sub-family B (MDR/TAP), member 9 / Q9JJ59* / Q9NP78* / ATP binding cassette subfamily B member 9*ENSDARG0000005620031
tap1 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / P21958* / Q03518* / transporter 1, ATP binding cassette subfamily B member*ENSDARG0000007976629
tap2a / transporter associated with antigen processing, subunit type a / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* / transporter 2, A...ENSDARG0000003678729
tap2t / transporter associated with antigen processing, subunit type t, teleost specific / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* ...ENSDARG0000003344627


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
Mitochondrial ABC transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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