ENSDARG00000061591


Danio rerio

Features
Gene ID: ENSDARG00000061591
  
Biological name :abcb10
  
Synonyms : abcb10 / ATP-binding cassette, sub-family B (MDR/TAP), member 10
  
Possible biological names infered from orthology : ATP binding cassette subfamily B member 10 / Q9JI39 / Q9NRK6
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 24263049
Gene end: 24277532
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000082438
Ensembl peptide - ENSDARP00000122988
NCBI entrez gene - 100003744     See in Manteia.
swissprot - B0V0U7
swissprot - F1Q5K6
ZFIN ID - ZDB-GENE-040525-2
Ensembl - ENSDARG00000061591
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCB10ENSGALG00000011096Gallus gallus
 ABCB10ENSG00000135776Homo sapiens
 Abcb10ENSMUSG00000031974Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcb8 / ATP-binding cassette, sub-family B (MDR/TAP), member 8 / Q9CXJ4* / Q9NUT2* / ATP binding cassette subfamily B member 8*ENSDARG0000005667234
abcb9 / ATP-binding cassette, sub-family B (MDR/TAP), member 9 / Q9JJ59* / Q9NP78* / ATP binding cassette subfamily B member 9*ENSDARG0000005620033
tap1 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / P21958* / Q03518* / transporter 1, ATP binding cassette subfamily B member*ENSDARG0000007976631
tap2a / transporter associated with antigen processing, subunit type a / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* / transporter 2, A...ENSDARG0000003678729
tap2t / transporter associated with antigen processing, subunit type t, teleost specific / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* ...ENSDARG0000003344627


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030260  ATP-binding cassette subfamily B member 10-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030218 erythrocyte differentiation IMP
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
Mitochondrial ABC transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism hemin decreased amount , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
nucleate erythrocyte hemoglobin complex decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000061591 abcb10 / ATP-binding cassette, sub-family B (MDR/TAP), member 10 / Q9JI39* / Q9NRK6* / ATP binding cassette subfamily B member 10*  / complex






 

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