ENSDARG00000036787


Danio rerio

Features
Gene ID: ENSDARG00000036787
  
Biological name :tap2a
  
Synonyms : tap2a / transporter associated with antigen processing, subunit type a
  
Possible biological names infered from orthology : AL669918.1 / P36371 / Q03519 / TAP2 / transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) / transporter 2, ATP binding cassette subfamily B member
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 7124337
Gene end: 7132315
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000028924
swissprot - Q1LWX8
ZFIN ID - ZDB-GENE-030616-245
Ensembl - ENSDARG00000036787
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAP2ENSGALG00000029381Gallus gallus
 AL669918.1ENSG00000250264Homo sapiens
 TAP2ENSG00000204267Homo sapiens
 Tap2ENSMUSG00000024339Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tap2t / transporter associated with antigen processing, subunit type t, teleost specific / TAP2* / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* ...ENSDARG0000003344645
abcb9 / ATP-binding cassette, sub-family B (MDR/TAP), member 9 / Q9JJ59* / Q9NP78* / ATP binding cassette subfamily B member 9*ENSDARG0000005620041
tap1 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / P21958* / Q03518* / transporter 1, ATP binding cassette subfamily B member*ENSDARG0000007976637
abcb8 / ATP-binding cassette, sub-family B (MDR/TAP), member 8 / Q9CXJ4* / Q9NUT2* / ATP binding cassette subfamily B member 8*ENSDARG0000005667229
abcb10 / ATP-binding cassette, sub-family B (MDR/TAP), member 10 / Q9JI39* / Q9NRK6* / ATP binding cassette subfamily B member 10*ENSDARG0000006159128


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046686 response to cadmium ion IEP
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ER-Phagosome pathway
Antigen Presentation: Folding, assembly and peptide loading of class I MHC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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