ENSDARG00000056741


Danio rerio

Features
Gene ID: ENSDARG00000056741
  
Biological name :senp3b
  
Synonyms : senp3b / SUMO1/sentrin/SMT3 specific peptidase 3b
  
Possible biological names infered from orthology : Q9EP97 / Q9H4L4 / SENP3 / SENP3-EIF4A1 / SENP3-EIF4A1 readthrough (NMD candidate) / Sentrin-specific protease 3 / SUMO1/sentrin/SMT3 specific peptidase 3
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 26518843
Gene end: 26532089
  
Corresponding Affymetrix probe sets: Dr.83.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000108940
NCBI entrez gene - 565123     See in Manteia.
RefSeq - NM_001083842
RefSeq Peptide - NP_001077311
swissprot - F1QS17
ZFIN ID - ZDB-GENE-030131-6714
Ensembl - ENSDARG00000056741
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SENP3ENSG00000161956Homo sapiens
 SENP3-EIF4A1ENSG00000277957Homo sapiens
 Senp3ENSMUSG00000005204Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
senp3a / SUMO1/sentrin/SMT3 specific peptidase 3a / SENP3* / Q9EP97* / Q9H4L4* / SENP3-EIF4A1* / Sentrin-specific protease 3 * / SUMO1/sentrin/SMT3 specific peptidase 3* / SENP3-EIF4A1 read...ENSDARG0000009553849
senp5 / SUMO1/sentrin specific peptidase 5 / Q6NXL6* / Q96HI0* / Sentrin-specific protease 5 *ENSDARG0000006064623
senp2 / SUMO1/sentrin/SMT3 specific peptidase 2 / Gm7275* / Gm5407* / Gm5415* / Q91ZX6* / Q9HC62* / AF366264* / 4930444G20Rik* / cDNA sequence AF366264* / RIKEN cDNA 4930444G20 gene* / Mus ...ENSDARG0000007383717
si:dkey-21c19.3 / SENP1* / Q9P0U3* / P59110* / Sentrin-specific protease 1 * / SUMO1/sentrin specific peptidase 1*ENSDARG0000007857417


Protein motifs (from Interpro)
Interpro ID Name
 IPR003653  Ulp1 protease family, C-terminal catalytic domain
 IPR011989  Armadillo-like helical


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016926 protein desumoylation IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0071339 MLL1 complex IEA
 molecular_functionGO:0004175 endopeptidase activity IBA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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