ENSMUSG00000005204


Mus musculus

Features
Gene ID: ENSMUSG00000005204
  
Biological name :Senp3
  
Synonyms : Q9EP97 / Senp3 / Sentrin-specific protease 3
  
Possible biological names infered from orthology : Q9H4L4 / SENP3-EIF4A1 / SENP3-EIF4A1 readthrough (NMD candidate) / SUMO1/sentrin/SMT3 specific peptidase 3
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: B3
Gene start: 69673115
Gene end: 69682084
  
Corresponding Affymetrix probe sets: 10387559 (MoGene1.0st)   1448866_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000005336
Ensembl peptide - ENSMUSP00000066581
Ensembl peptide - ENSMUSP00000114791
NCBI entrez gene - 80886     See in Manteia.
MGI - MGI:2158736
RefSeq - XM_006534530
RefSeq - NM_001163571
RefSeq - NM_030702
RefSeq Peptide - NP_001157043
RefSeq Peptide - NP_109627
swissprot - Q9EP97
swissprot - F6Z9L5
Ensembl - ENSMUSG00000005204
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 senp3aENSDARG00000095538Danio rerio
 senp3bENSDARG00000056741Danio rerio
 SENP3ENSG00000161956Homo sapiens
 SENP3-EIF4A1ENSG00000277957Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Senp5 / Q6NXL6 / Sentrin-specific protease 5 / Q96HI0* / SUMO1/sentrin specific peptidase 5*ENSMUSG0000002277233
Senp1 / P59110 / Sentrin-specific protease 1 / Q9P0U3* / SUMO1/sentrin specific peptidase 1*ENSMUSG0000003307521
Senp2 / Q91ZX6 / Mus musculus SUMO/sentrin specific peptidase 2 (Senp2), transcript variant 3, mRNA. / Q9HC62* / SUMO1/sentrin/SMT3 specific peptidase 2*ENSMUSG0000002285519
AF366264 / cDNA sequence AF366264ENSMUSG0000005711616
4930444G20Rik / RIKEN cDNA 4930444G20 geneENSMUSG0000006971215
Gm5415ENSMUSG0000009131815
Gm7275ENSMUSG0000006771613
Gm5407ENSMUSG0000005817613


Protein motifs (from Interpro)
Interpro ID Name
 IPR003653  Ulp1 protease family, C-terminal catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016926 protein desumoylation IEA
 biological_processGO:0019538 protein metabolic process IDA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0071339 MLL1 complex IEA
 molecular_functionGO:0004175 endopeptidase activity IBA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002965 hyperalbuminemia "blood albumin concentration above the normal range" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, RGD:Rat Genome Database submission]
Show

Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

 MP:0004924 abnormal behavior "anomalies in the actions, reactions, or performance of an organism in response to external or internal stimuli compared to controls" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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