ENSG00000161956


Homo sapiens

Features
Gene ID: ENSG00000161956
  
Biological name :SENP3
  
Synonyms : Q9H4L4 / SENP3 / SUMO1/sentrin/SMT3 specific peptidase 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.1
Gene start: 7561875
Gene end: 7571969
  
Corresponding Affymetrix probe sets: 203871_at (Human Genome U133 Plus 2.0 Array)   215113_s_at (Human Genome U133 Plus 2.0 Array)   215114_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000463358
Ensembl peptide - ENSP00000482398
Ensembl peptide - ENSP00000479187
Ensembl peptide - ENSP00000464172
Ensembl peptide - ENSP00000314029
Ensembl peptide - ENSP00000403712
Ensembl peptide - ENSP00000462461
NCBI entrez gene - 26168     See in Manteia.
OMIM - 612844
RefSeq - NM_015670
RefSeq Peptide - NP_056485
swissprot - J3QL36
swissprot - J3QRE4
swissprot - A0A087WZ63
swissprot - Q9H4L4
swissprot - A0A087WV50
swissprot - J3KSF5
Ensembl - ENSG00000161956
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 senp3aENSDARG00000095538Danio rerio
 senp3bENSDARG00000056741Danio rerio
 Senp3ENSMUSG00000005204Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SENP3-EIF4A1 / SENP3-EIF4A1 readthrough (NMD candidate)ENSG0000027795788
SENP5 / Q96HI0 / SUMO1/sentrin specific peptidase 5ENSG0000011923135
SENP1 / Q9P0U3 / SUMO1/sentrin specific peptidase 1ENSG0000007938721
SENP2 / Q9HC62 / SUMO1/sentrin/SMT3 specific peptidase 2ENSG0000016390420


Protein motifs (from Interpro)
Interpro ID Name
 IPR003653  Ulp1 protease family, C-terminal catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016926 protein desumoylation IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0071339 MLL1 complex IDA
 molecular_functionGO:0004175 endopeptidase activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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