ENSDARG00000073837


Danio rerio

Features
Gene ID: ENSDARG00000073837
  
Biological name :senp2
  
Synonyms : senp2 / SUMO1/sentrin/SMT3 specific peptidase 2
  
Possible biological names infered from orthology : 4930444G20Rik / AF366264 / cDNA sequence AF366264 / Gm5407 / Gm5415 / Gm7275 / Mus musculus SUMO/sentrin specific peptidase 2 (Senp2), transcript variant 3, mRNA. / Q91ZX6 / Q9HC62 / RIKEN cDNA 4930444G20 gene
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 11397269
Gene end: 11415635
  
Corresponding Affymetrix probe sets: Dr.23807.1.A1_at (Zebrafish Array)   Dr.6810.1.A1_at (Zebrafish Array)   XM_679191_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000126129
Ensembl peptide - ENSDARP00000101246
NCBI entrez gene - 556400     See in Manteia.
RefSeq - XM_679191
swissprot - I3IT72
swissprot - E7F9K9
ZFIN ID - ZDB-GENE-060810-183
Ensembl - ENSDARG00000073837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SENP2ENSGALG00000031128Gallus gallus
 SENP2ENSG00000163904Homo sapiens
 4930444G20RikENSMUSG00000069712Mus musculus
 AF366264ENSMUSG00000057116Mus musculus
 Gm5407ENSMUSG00000058176Mus musculus
 Gm5415ENSMUSG00000091318Mus musculus
 Gm7275ENSMUSG00000067716Mus musculus
 Senp2ENSMUSG00000022855Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-21c19.3 / SENP1* / Q9P0U3* / P59110* / Sentrin-specific protease 1 * / SUMO1/sentrin specific peptidase 1*ENSDARG0000007857428
senp3b / SUMO1/sentrin/SMT3 specific peptidase 3b / SENP3* / Q9EP97* / Q9H4L4* / SENP3-EIF4A1* / Sentrin-specific protease 3 * / SUMO1/sentrin/SMT3 specific peptidase 3* / SENP3-EIF4A1 read...ENSDARG0000005674116
senp3a / SUMO1/sentrin/SMT3 specific peptidase 3a / SENP3* / Q9EP97* / Q9H4L4* / SENP3-EIF4A1* / Sentrin-specific protease 3 * / SUMO1/sentrin/SMT3 specific peptidase 3* / SENP3-EIF4A1 read...ENSDARG0000009553815
senp5 / SUMO1/sentrin specific peptidase 5 / Q6NXL6* / Q96HI0* / Sentrin-specific protease 5 *ENSDARG0000006064614


Protein motifs (from Interpro)
Interpro ID Name
 IPR003653  Ulp1 protease family, C-terminal catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016926 protein desumoylation IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0004175 endopeptidase activity IBA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA


Pathways (from Reactome)
Pathway description
SUMO is proteolytically processed


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000102741 sumo2b / Q6DHL4 / small ubiquitin-like modifier 2b / SUMO4* / SUMO2* / Q6EEV6* / P61956* / P61957* / small ubiquitin-like modifier 4* / small ubiquitin-like modifier 2*  / reaction
 ENSDARG00000035993 sumo3b / small ubiquitin-like modifier 3b / SUMO3* / P55854* / small ubiquitin-like modifier 3*  / reaction
 ENSDARG00000044267 sumo1 / Q7SZR5 / small ubiquitin-like modifier 1 / P63166* / P63165* / Small ubiquitin-related modifier 1 *  / reaction
 ENSDARG00000028119 Q6NV25 / sumo3a / small ubiquitin-like modifier 3a / SUMO3* / Q9Z172* / P55854* / small ubiquitin-like modifier 3*  / reaction






 

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