ENSDARG00000056742


Danio rerio

Features
Gene ID: ENSDARG00000056742
  
Biological name :crmp1
  
Synonyms : collapsin response mediator protein 1 / crmp1
  
Possible biological names infered from orthology : Dihydropyrimidinase-related protein 1 / P97427 / Q14194
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 14348399
Gene end: 14364710
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064467
NCBI entrez gene - 553756     See in Manteia.
RefSeq - NM_001020725
RefSeq Peptide - NP_001018561
swissprot - F1QR62
ZFIN ID - ZDB-GENE-050720-1
Ensembl - ENSDARG00000056742
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRMP1ENSGALG00000041203Gallus gallus
 CRMP1ENSG00000072832Homo sapiens
 Crmp1ENSMUSG00000029121Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DPYSL2 (1 of many) / dihydropyrimidinase like 2 / DPYSL2* / Q16555*ENSDARG0000003897468
dpysl4 / dihydropyrimidinase-like 4 / O14531*ENSDARG0000010349065
dpysl3 / Q52PJ5 / dihydropyrimidinase-like 3 / Q14195*ENSDARG0000000258765
dpysl2b / dihydropyrimidinase-like 2b / Q16555* / DPYSL2* / O08553* / dihydropyrimidinase like 2* / Dihydropyrimidinase-related protein 2 *ENSDARG0000003208365
dpysl5b / dihydropyrimidinase-like 5bENSDARG0000005931150
dpysl5a / dihydropyrimidinase-like 5aENSDARG0000001114149
dpys / dihydropyrimidinase / Q14117* / Q9EQF5*ENSDARG0000007954349
zgc:103559ENSDARG0000003829320


Protein motifs (from Interpro)
Interpro ID Name
 IPR006680  Amidohydrolase-related
 IPR011059  Metal-dependent hydrolase, composite domain superfamily
 IPR011778  Hydantoinase/dihydropyrimidinase
 IPR030624  Dihydropyrimidinase-related protein 1
 IPR032466  Metal-dependent hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007411 axon guidance IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA


Pathways (from Reactome)
Pathway description
CRMPs in Sema3A signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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