ENSDARG00000056885


Danio rerio

Features
Gene ID: ENSDARG00000056885
  
Biological name :per1a
  
Synonyms : per1a / period circadian clock 1a
  
Possible biological names infered from orthology : O15534 / O35973 / PER1 / Period circadian protein homolog 1 / period circadian regulator 1
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 22809715
Gene end: 22831611
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073915
Ensembl peptide - ENSDARP00000131343
Ensembl peptide - ENSDARP00000091241
NCBI entrez gene - 563926     See in Manteia.
RefSeq - NM_001030183
RefSeq Peptide - NP_001025354
swissprot - B3DJN2
swissprot - A0A0R4ICG0
swissprot - Q7SZZ4
ZFIN ID - ZDB-GENE-011220-1
Ensembl - ENSDARG00000056885
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PER1ENSG00000179094Homo sapiens
 Per1ENSMUSG00000020893Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
per1b / period circadian clock 1b / PER1* / O35973* / O15534* / period circadian regulator 1* / Period circadian protein homolog 1 *ENSDARG0000001249958
per2 / period circadian clock 2 / O15055* / period circadian regulator 2*ENSDARG0000003450340
per3 / period circadian clock 3 / P56645* / O70361* / period circadian regulator 3* / Period circadian protein homolog 3 *ENSDARG0000001051934


Protein motifs (from Interpro)
Interpro ID Name
 IPR000014  PAS domain
 IPR013655  PAS fold-3
 IPR022728  Period circadian-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009648 photoperiodism IEP
 biological_processGO:0042542 response to hydrogen peroxide IEP
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr