ENSDARG00000056913


Danio rerio

Features
Gene ID: ENSDARG00000056913
  
Biological name :pcolcea
  
Synonyms : pcolcea / procollagen C-endopeptidase enhancer a
  
Possible biological names infered from orthology : PCOLCE / procollagen C-endopeptidase enhancer / Procollagen C-endopeptidase enhancer 1 / Q15113 / Q61398
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 22789319
Gene end: 22803854
  
Corresponding Affymetrix probe sets: Dr.15554.1.A1_at (Zebrafish Array)   NM_001030181_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000147025
Ensembl peptide - ENSDARP00000073925
Ensembl peptide - ENSDARP00000110048
Ensembl peptide - ENSDARP00000151294
NCBI entrez gene - 563867     See in Manteia.
RefSeq - NM_001030181
RefSeq Peptide - NP_001025352
swissprot - F1QUX0
swissprot - Q1ECX8
swissprot - Q7SZZ3
ZFIN ID - ZDB-GENE-041014-370
Ensembl - ENSDARG00000056913
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCOLCEENSG00000106333Homo sapiens
 PcolceENSMUSG00000029718Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcolceb / procollagen C-endopeptidase enhancer b / Q61398* / PCOLCE* / Q15113* / procollagen C-endopeptidase enhancer* / Procollagen C-endopeptidase enhancer 1 *ENSDARG0000005205760
pimr62 / pcolce2b / procollagen C-endopeptidase enhancer 2b / Q9UKZ9* / Q8R4W6* / PCOLCE2* / procollagen C-endopeptidase enhancer 2*ENSDARG0000005557542
pcolce2a / procollagen C-endopeptidase enhancer 2a / Q9UKZ9* / Q8R4W6* / PCOLCE2* / procollagen C-endopeptidase enhancer 2*ENSDARG0000000845039
cubn / cubilin (intrinsic factor-cobalamin receptor) / O60494* / cubilin*ENSDARG0000008701325
cdcp2 / CUB domain containing protein 2 / Q5VXM1* / Q8BQH6*ENSDARG0000007586624
bmp1a / bone morphogenetic protein 1a / BMP1* / P13497* / bone morphogenetic protein 1*ENSDARG0000002807124
tll1 / O57460 / tolloid-like 1 / O43897* / tolloid-like*ENSDARG0000003742923
bmp1b / bone morphogenetic protein 1b / BMP1* / P98063* / P13497* / Bone morphotic protein 1 * / bone morphogenetic protein 1*ENSDARG0000002805323
si:cabz01033205.3 / MFRP* / Q8K480* / Q9BY79* / membrane frizzled-related protein*ENSDARG0000008781417
neto2b / neuropilin (NRP) and tolloid (TLL)-like 2b / NETO2* / Q8NC67* / Q8BNJ6* / neuropilin and tolloid like 2* / Mus musculus neuropilin (NRP) and tolloid (TLL)-like 2 (Neto2), transcrip...ENSDARG0000006329314
neto2b / neuropilin (NRP) and tolloid (TLL)-like 2b / NETO2* / Q8NC67* / neuropilin and tolloid like 2*ENSDARG0000011210014
neto1l / neuropilin (NRP) and tolloid (TLL)-like 1, like / NETO1* / Q8TDF5* / Q8R4I7* / neuropilin and tolloid like 1* / Neuropilin and tolloid-like protein 1 *ENSDARG0000007159613
neto1 / neuropilin (NRP) and tolloid (TLL)-like 1 / Q8TDF5* / Q8R4I7* / neuropilin and tolloid like 1* / Neuropilin and tolloid-like protein 1 *ENSDARG0000006848312


Protein motifs (from Interpro)
Interpro ID Name
 IPR000859  CUB domain
 IPR001134  Netrin domain
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR018933  Netrin module, non-TIMP type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010952 positive regulation of peptidase activity IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0005518 collagen binding IEA
 molecular_functionGO:0008201 heparin binding IEA
 molecular_functionGO:0016504 peptidase activator activity IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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