ENSDARG00000055575


Danio rerio

Features
Gene ID: ENSDARG00000055575
  
Biological name :pcolce2b
  
Synonyms : pcolce2b / pimr62 / procollagen C-endopeptidase enhancer 2b
  
Possible biological names infered from orthology : PCOLCE2 / procollagen C-endopeptidase enhancer 2 / Q8R4W6 / Q9UKZ9
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 5871589
Gene end: 5910811
  
Corresponding Affymetrix probe sets: Dr.15092.1.A1_at (Zebrafish Array)   NM_200460_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000072417
Ensembl peptide - ENSDARP00000141205
NCBI entrez gene - 393432     See in Manteia.
RefSeq - NM_200460
RefSeq Peptide - NP_956754
swissprot - F1R774
swissprot - A0A0H2UK90
ZFIN ID - ZDB-GENE-040426-1177
ZFIN ID - ZDB-GENE-131120-108
Ensembl - ENSDARG00000055575
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCOLCE2ENSGALG00000002623Gallus gallus
 Q9UKZ9ENSG00000163710Homo sapiens
 Q8R4W6ENSMUSG00000015354Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcolce2a / procollagen C-endopeptidase enhancer 2a / Q9UKZ9* / Q8R4W6* / PCOLCE2* / procollagen C-endopeptidase enhancer 2*ENSDARG0000000845065
pcolcea / procollagen C-endopeptidase enhancer a / Q61398* / PCOLCE* / Q15113* / procollagen C-endopeptidase enhancer* / Procollagen C-endopeptidase enhancer 1 *ENSDARG0000005691349
pcolceb / procollagen C-endopeptidase enhancer b / Q61398* / PCOLCE* / Q15113* / procollagen C-endopeptidase enhancer* / Procollagen C-endopeptidase enhancer 1 *ENSDARG0000005205748
cubn / cubilin (intrinsic factor-cobalamin receptor) / O60494* / cubilin*ENSDARG0000008701327
cdcp2 / CUB domain containing protein 2 / Q5VXM1* / Q8BQH6*ENSDARG0000007586626
tll1 / O57460 / tolloid-like 1 / O43897* / tolloid-like*ENSDARG0000003742926
bmp1a / bone morphogenetic protein 1a / BMP1* / P13497* / bone morphogenetic protein 1*ENSDARG0000002807125
bmp1b / bone morphogenetic protein 1b / BMP1* / P98063* / P13497* / Bone morphotic protein 1 * / bone morphogenetic protein 1*ENSDARG0000002805324
neto2b / neuropilin (NRP) and tolloid (TLL)-like 2b / NETO2* / Q8NC67* / Q8BNJ6* / neuropilin and tolloid like 2* / Mus musculus neuropilin (NRP) and tolloid (TLL)-like 2 (Neto2), transcrip...ENSDARG0000006329318
si:cabz01033205.3 / MFRP* / Q8K480* / Q9BY79* / membrane frizzled-related protein*ENSDARG0000008781418
neto2b / neuropilin (NRP) and tolloid (TLL)-like 2b / NETO2* / Q8NC67* / neuropilin and tolloid like 2*ENSDARG0000011210017
neto1l / neuropilin (NRP) and tolloid (TLL)-like 1, like / NETO1* / Q8TDF5* / Q8R4I7* / neuropilin and tolloid like 1* / Neuropilin and tolloid-like protein 1 *ENSDARG0000007159616
neto1 / neuropilin (NRP) and tolloid (TLL)-like 1 / Q8TDF5* / Q8R4I7* / neuropilin and tolloid like 1* / Neuropilin and tolloid-like protein 1 *ENSDARG0000006848315


Protein motifs (from Interpro)
Interpro ID Name
 IPR000859  CUB domain
 IPR001134  Netrin domain
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR018933  Netrin module, non-TIMP type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr