ENSDARG00000056923


Danio rerio

Features
Gene ID: ENSDARG00000056923
  
Biological name :dbr1
  
Synonyms : dbr1 / debranching RNA lariats 1
  
Possible biological names infered from orthology : Lariat debranching enzyme / Q923B1 / Q9UK59
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 27860332
Gene end: 27868267
  
Corresponding Affymetrix probe sets: Dr.5077.1.S1_at (Zebrafish Array)   NM_199653_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073957
NCBI entrez gene - 323746     See in Manteia.
RefSeq - NM_199653
RefSeq Peptide - NP_955947
swissprot - A8WHX2
ZFIN ID - ZDB-GENE-030131-2466
Ensembl - ENSDARG00000056923
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DBR1ENSGALG00000043797Gallus gallus
 DBR1ENSG00000138231Homo sapiens
 Dbr1ENSMUSG00000032469Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR007708  Lariat debranching enzyme, C-terminal
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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