ENSG00000138231


Homo sapiens

Features
Gene ID: ENSG00000138231
  
Biological name :DBR1
  
Synonyms : DBR1 / debranching RNA lariats 1 / Q9UK59
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q22.3
Gene start: 138161012
Gene end: 138174949
  
Corresponding Affymetrix probe sets: 219149_x_at (Human Genome U133 Plus 2.0 Array)   234295_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000260803
Ensembl peptide - ENSP00000417262
NCBI entrez gene - 51163     See in Manteia.
OMIM - 607024
RefSeq - NM_016216
RefSeq Peptide - NP_057300
swissprot - Q9UK59
swissprot - F8WAY1
Ensembl - ENSG00000138231
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dbr1ENSDARG00000056923Danio rerio
 DBR1ENSGALG00000043797Gallus gallus
 Dbr1ENSMUSG00000032469Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR007708  Lariat debranching enzyme, C-terminal
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000375 RNA splicing, via transesterification reactions IMP
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0008419 RNA lariat debranching enzyme activity IMP
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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