ENSGALG00000043797


Gallus gallus

Features
Gene ID: ENSGALG00000043797
  
Biological name :DBR1
  
Synonyms : DBR1 / Lariat debranching enzyme / Q5ZLM2
  
Possible biological names infered from orthology : debranching RNA lariats 1 / Q923B1 / Q9UK59
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 621053
Gene end: 628970
  
Corresponding Affymetrix probe sets: GgaAffx.11815.1.S1_at (Chicken Array)   GgaAffx.787.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055797
NCBI entrez gene - 429118     See in Manteia.
RefSeq - NM_001031566
RefSeq Peptide - NP_001026737
swissprot - Q5ZLM2
Ensembl - ENSGALG00000043797
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dbr1ENSDARG00000056923Danio rerio
 DBR1ENSG00000138231Homo sapiens
 Dbr1ENSMUSG00000032469Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004843  Calcineurin-like phosphoesterase domain, ApaH type
 IPR007708  Lariat debranching enzyme, C-terminal
 IPR029052  Metallo-dependent phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000375 RNA splicing, via transesterification reactions IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0008419 RNA lariat debranching enzyme activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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