ENSDARG00000057125


Danio rerio

Features
Gene ID: ENSDARG00000057125
  
Biological name :pld1b
  
Synonyms : phospholipase D1b / pld1b
  
Possible biological names infered from orthology : phospholipase D1 / PLD1 / Q13393
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 26659010
Gene end: 26715174
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000074178
NCBI entrez gene - 572492     See in Manteia.
swissprot - F1QEI7
swissprot - F1QKJ2
ZFIN ID - ZDB-GENE-070510-3
Ensembl - ENSDARG00000057125
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000009252Gallus gallus
 PLD1ENSG00000075651Homo sapiens
 Pld1ENSMUSG00000027695Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pld1a / phospholipase D1a / PLD1* / Q13393* / phospholipase D1*ENSDARG0000005622873
pld2 / phospholipase D2 / O14939* / P97813*ENSDARG0000003426248
si:ch211-168k14.2ENSDARG0000005619123


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR001736  Phospholipase D/Transphosphatidylase
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015679  Phospholipase D family
 IPR025202  Phospholipase D-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006654 phosphatidic acid biosynthetic process IEA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0032534 regulation of microvillus assembly IBA
 biological_processGO:0048017 inositol lipid-mediated signaling IEA
 biological_processGO:0048870 cell motility IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005794 Golgi apparatus IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004630 phospholipase D activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PA
Role of phospholipids in phagocytosis
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr