ENSG00000075651


Homo sapiens

Features
Gene ID: ENSG00000075651
  
Biological name :PLD1
  
Synonyms : phospholipase D1 / PLD1 / Q13393
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q26.31
Gene start: 171600405
Gene end: 171810950
  
Corresponding Affymetrix probe sets: 1557126_a_at (Human Genome U133 Plus 2.0 Array)   1569660_at (Human Genome U133 Plus 2.0 Array)   177_at (Human Genome U133 Plus 2.0 Array)   205203_at (Human Genome U133 Plus 2.0 Array)   215723_s_at (Human Genome U133 Plus 2.0 Array)   215724_at (Human Genome U133 Plus 2.0 Array)   226636_at (Human Genome U133 Plus 2.0 Array)   232530_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000400639
Ensembl peptide - ENSP00000395556
Ensembl peptide - ENSP00000486967
Ensembl peptide - ENSP00000328422
Ensembl peptide - ENSP00000342793
Ensembl peptide - ENSP00000348681
Ensembl peptide - ENSP00000391164
NCBI entrez gene - 5337     See in Manteia.
OMIM - 602382
RefSeq - XM_017006623
RefSeq - NM_001130081
RefSeq - NM_002662
RefSeq - XM_005247533
RefSeq - XM_005247534
RefSeq - XM_011512897
RefSeq - XM_011512898
RefSeq Peptide - NP_001123553
RefSeq Peptide - NP_002653
swissprot - H7C0L3
swissprot - Q13393
swissprot - C9IY79
swissprot - Q8WYW5
swissprot - F8WBV7
Ensembl - ENSG00000075651
  
Related genetic diseases (OMIM): 212093 - Cardiac valvular defect, developmental, 212093
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pld1aENSDARG00000056228Danio rerio
 pld1bENSDARG00000057125Danio rerio
 ENSGALG00000009252Gallus gallus
 Pld1ENSMUSG00000027695Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PLD2 / O14939 / phospholipase D2ENSG0000012921948


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR001736  Phospholipase D/Transphosphatidylase
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR015679  Phospholipase D family
 IPR016555  Phospholipase D, eukaryotic type
 IPR025202  Phospholipase D-like domain
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006654 phosphatidic acid biosynthetic process TAS
 biological_processGO:0006935 chemotaxis TAS
 biological_processGO:0007264 small GTPase mediated signal transduction TAS
 biological_processGO:0007265 Ras protein signal transduction TAS
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0032534 regulation of microvillus assembly IMP
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0048017 inositol lipid-mediated signaling IEA
 biological_processGO:0048870 cell motility IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005765 lysosomal membrane HDA
 cellular_componentGO:0005768 endosome IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0016324 apical plasma membrane IDA
 cellular_componentGO:0030139 endocytic vesicle IDA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0070821 tertiary granule membrane TAS
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004630 phospholipase D activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0070290 N-acylphosphatidylethanolamine-specific phospholipase D activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PG
Synthesis of PA
Role of phospholipids in phagocytosis
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000072 Hydroureter "The distention of the ureter with urine." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0001634 Mitral valve prolapse 
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 HP:0001655 Patent foramen ovale 
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 HP:0001704 Tricuspid valve prolapse 
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 HP:0001718 Mitral stenosis 
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 HP:0001789 Hydrops fetalis 
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 HP:0005180 Tricuspid insufficiency 
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 HP:0008722 Urethral diverticulum "The presence of a diverticulum (sac or pouch) in the wall of the urethra." [HPO:curators]
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 HP:0031014 Arteria lusoria "Usually, three large arteries arise from the arch of the aorta: the brachiocephalic trunk (divided into the right common carotid artery and the right subclavian artery), the left common carotid artery, and the left subclavian artery. However, when aberrant right subclavian artery variant is present, the brachiocephalic trunk is absent and four large arteries arise from the arch of the aorta: the right common carotid artery, the left common carotid artery, the left subclavian artery, and the final one with the most distal left sided origin, the right subclavian artery, also called the arteria lusoria." [PMID:25105156]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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