ENSDARG00000058159


Danio rerio

Features
Gene ID: ENSDARG00000058159
  
Biological name :ipo8
  
Synonyms : importin 8 / ipo8
  
Possible biological names infered from orthology : O15397 / Q7TMY7
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 9360532
Gene end: 9389359
  
Corresponding Affymetrix probe sets: Dr.14745.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000110587
Ensembl peptide - ENSDARP00000148856
Ensembl peptide - ENSDARP00000129258
NCBI entrez gene - 555520     See in Manteia.
RefSeq - NM_001044334
RefSeq Peptide - NP_001037799
swissprot - B7ZV68
swissprot - A5WW24
ZFIN ID - ZDB-GENE-060503-3
Ensembl - ENSDARG00000058159
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IPO8ENSGALG00000012953Gallus gallus
 IPO8ENSG00000133704Homo sapiens
 Ipo8ENSMUSG00000040029Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ipo7 / importin 7 / O95373* / Q9EPL8*ENSDARG0000003575161


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR013713  Exportin/Importin, Cse1-like
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007165 signal transduction IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IBA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000057026 ran / P79735 / RAN, member RAS oncogene family / P62827* / P62826* / Q61820* / Rasl2-9* / 1700009N14Rik* / RIKEN cDNA 1700009N14 gene* / RAS-like, family 2, locus 9* / GTP-binding nuclear p...  / reaction / complex






 

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contact: otassy@igbmc.fr