ENSDARG00000058162


Danio rerio

Features
Gene ID: ENSDARG00000058162
  
Biological name :pcyt1ba
  
Synonyms : pcyt1ba / phosphate cytidylyltransferase 1, choline, beta a
  
Possible biological names infered from orthology : Choline-phosphate cytidylyltransferase B / PCYT1B / phosphate cytidylyltransferase 1, choline, beta / Q811Q9 / Q9Y5K3
  
Species: Danio rerio
  
Chr. number: 24
Strand: 1
Band:
Gene start: 24923166
Gene end: 24935849
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000065287
NCBI entrez gene - 100001552     See in Manteia.
RefSeq - NM_001082946
RefSeq Peptide - NP_001076415
swissprot - A3KNL3
ZFIN ID - ZDB-GENE-061220-4
Ensembl - ENSDARG00000058162
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCYT1BENSGALG00000016318Gallus gallus
 PCYT1BENSG00000102230Homo sapiens
 Pcyt1bENSMUSG00000035246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcyt1bb / phosphate cytidylyltransferase 1, choline, beta b / Q811Q9* / PCYT1B* / Q9Y5K3* / Choline-phosphate cytidylyltransferase B * / phosphate cytidylyltransferase 1, choline, beta*ENSDARG0000010420773
pcyt1aa / pcyt1ab / phosphate cytidylyltransferase 1, choline, alpha a / PCYT1A* / P49585* / P49586* / Choline-phosphate cytidylyltransferase A * / phosphate cytidylyltransferase 1, choline, alpha*ENSDARG0000001123367
pcyt1ab / phosphate cytidylyltransferase 1, choline, alpha b / P49585* / PCYT1A* / phosphate cytidylyltransferase 1, choline, alpha*ENSDARG0000000449263


Protein motifs (from Interpro)
Interpro ID Name
 IPR004821  Cytidyltransferase-like domain
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 molecular_functionGO:0003824 catalytic activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000104207 pcyt1bb / phosphate cytidylyltransferase 1, choline, beta b / Q811Q9* / PCYT1B* / Q9Y5K3* / Choline-phosphate cytidylyltransferase B * / phosphate cytidylyltransferase 1, choline, beta*  / complex
 ENSDARG00000058162 pcyt1ba / phosphate cytidylyltransferase 1, choline, beta a / Q811Q9* / PCYT1B* / Q9Y5K3* / Choline-phosphate cytidylyltransferase B * / phosphate cytidylyltransferase 1, choline, beta*  / complex






 

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