ENSG00000102230


Homo sapiens

Features
Gene ID: ENSG00000102230
  
Biological name :PCYT1B
  
Synonyms : PCYT1B / phosphate cytidylyltransferase 1, choline, beta / Q9Y5K3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: p22.11
Gene start: 24558087
Gene end: 24672677
  
Corresponding Affymetrix probe sets: 206751_s_at (Human Genome U133 Plus 2.0 Array)   210456_at (Human Genome U133 Plus 2.0 Array)   232553_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000349211
Ensembl peptide - ENSP00000368439
Ensembl peptide - ENSP00000368440
Ensembl peptide - ENSP00000436562
NCBI entrez gene - 9468     See in Manteia.
OMIM - 300948
RefSeq - XM_017029977
RefSeq - NM_001163264
RefSeq - NM_001163265
RefSeq - NM_004845
RefSeq Peptide - NP_001156736
RefSeq Peptide - NP_001156737
RefSeq Peptide - NP_004836
swissprot - Q9Y5K3
swissprot - F2Z2B1
Ensembl - ENSG00000102230
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pcyt1baENSDARG00000058162Danio rerio
 pcyt1bbENSDARG00000104207Danio rerio
 PCYT1BENSGALG00000016318Gallus gallus
 Pcyt1bENSMUSG00000035246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P49585 / PCYT1A / phosphate cytidylyltransferase 1, choline, alphaENSG0000016121767


Protein motifs (from Interpro)
Interpro ID Name
 IPR004821  Cytidyltransferase-like domain
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001541 ovarian follicle development IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006656 phosphatidylcholine biosynthetic process TAS
 biological_processGO:0006657 CDP-choline pathway IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0008654 phospholipid biosynthetic process IEA
 biological_processGO:0009058 biosynthetic process IEA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004105 choline-phosphate cytidylyltransferase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000102230 PCYT1B / Q9Y5K3 / phosphate cytidylyltransferase 1, choline, beta  / complex






 

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