ENSDARG00000058306


Danio rerio

Features
Gene ID: ENSDARG00000058306
  
Biological name :prpf18
  
Synonyms : PRP18 pre-mRNA processing factor 18 homolog (yeast) / prpf18
  
Possible biological names infered from orthology : AL157392.5 / pre-mRNA processing factor 18 / Q8BM39 / Q99633
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 8402129
Gene end: 8408518
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000075597
Ensembl peptide - ENSDARP00000134309
NCBI entrez gene - 431751     See in Manteia.
swissprot - A0A0R4IGS3
swissprot - Z4YHX5
ZFIN ID - ZDB-GENE-040704-45
Ensembl - ENSDARG00000058306
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000043593Gallus gallus
 AL157392.5ENSG00000282246Homo sapiens
 PRPF18ENSG00000165630Homo sapiens
 Prpf18ENSMUSG00000039449Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004098  Prp18
 IPR014906  Pre-mRNA processing factor 4 (PRP4)-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005681 spliceosomal complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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