ENSG00000282246


Homo sapiens

Features
Gene ID: ENSG00000282246
  
Biological name :AL157392.5
  
Synonyms : AL157392.5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: p13
Gene start: 13610047
Gene end: 13655929
  
Corresponding Affymetrix probe sets: 221547_at (Human Genome U133 Plus 2.0 Array)   223685_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000469146
Ensembl peptide - ENSP00000469443
Ensembl peptide - ENSP00000473200
swissprot - M0QXG2
swissprot - M0QXX3
swissprot - M0R3G1
Ensembl - ENSG00000282246
  
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prpf18ENSDARG00000058306Danio rerio
 ENSGALG00000043593Gallus gallus
 Prpf18ENSMUSG00000039449Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRPF18 / Q99633 / pre-mRNA processing factor 18ENSG0000016563095


Protein motifs (from Interpro)
Interpro ID Name
 IPR004098  Prp18


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000350 generation of catalytic spliceosome for second transesterification step IBA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0071048 nuclear retention of unspliced pre-mRNA at the site of transcription IBA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005682 U5 snRNP IBA
 cellular_componentGO:0046540 U4/U6 x U5 tri-snRNP complex IBA
 cellular_componentGO:0071021 U2-type post-spliceosomal complex IBA
 molecular_functionGO:0000386 second spliceosomal transesterification activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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